Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 AC027307.3-201ENST00000594262 1100 ntBASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 AL133215.2-201ENST00000609242 977 ntBASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 AC087499.5-201ENST00000452760 1342 ntBASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 AC006277.1-201ENST00000624348 1610 ntBASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 RN7SL692P-201ENST00000464677 288 ntBASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 RN7SL828P-201ENST00000607615 303 ntBASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 AC004233.3-201ENST00000607794 1269 ntBASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 TUBB8P12-201ENST00000308911 1335 ntBASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 TUBB7P-202ENST00000428444 1305 ntBASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 TUBB8P7-204ENST00000567960 1332 ntBASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM71Q2Q1W2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 AL353705.2-201ENST00000428243 662 ntBASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 AC098859.1-201ENST00000502915 1238 ntBASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM71Q2Q1W2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 AC092053.1-201ENST00000605787 1936 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms