Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 AC109635.5-201ENST00000533593 962 ntBASIC20.21■□□□□ 0.83
RFX7Q2KHR2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 RARRES2P8-201ENST00000566335 367 ntBASIC20.21■□□□□ 0.83
RFX7Q2KHR2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 AL512652.2-201ENST00000625156 1716 ntBASIC20.21■□□□□ 0.83
RFX7Q2KHR2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 AC069335.1-201ENST00000489972 472 ntBASIC20.21■□□□□ 0.83
RFX7Q2KHR2 AC079140.1-201ENST00000508039 487 ntBASIC20.21■□□□□ 0.83
RFX7Q2KHR2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 AC243562.1-201ENST00000560672 389 ntBASIC20.21■□□□□ 0.83
RFX7Q2KHR2 SPCS2P1-201ENST00000561636 679 ntBASIC20.21■□□□□ 0.83
RFX7Q2KHR2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.2■□□□□ 0.82
RFX7Q2KHR2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 AC106820.2-201ENST00000563775 3264 ntBASIC20.2■□□□□ 0.82
RFX7Q2KHR2 AL671710.1-201ENST00000610245 2349 ntBASIC20.2■□□□□ 0.82
RFX7Q2KHR2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 AL009183.1-201ENST00000603760 355 ntBASIC20.2■□□□□ 0.82
RFX7Q2KHR2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX7Q2KHR2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 AL031731.1-201ENST00000642131 2094 ntBASIC20.19■□□□□ 0.82
RFX7Q2KHR2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.19■□□□□ 0.82
RFX7Q2KHR2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms