Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERVK_113P62684 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HERVK_113P62684 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERVK_113P62684 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERVK_113P62684 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.43■□□□□ 0.7
HERVK_113P62684 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.43■□□□□ 0.7
HERVK_113P62684 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.43■□□□□ 0.7
HERVK_113P62684 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HERVK_113P62684 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.43■□□□□ 0.7
HERVK_113P62684 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HERVK_113P62684 LINC02560-201ENST00000596379 459 ntBASIC19.43■□□□□ 0.7
HERVK_113P62684 AC012645.4-201ENST00000610691 1061 ntBASIC19.43■□□□□ 0.7
HERVK_113P62684 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERVK_113P62684 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERVK_113P62684 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HERVK_113P62684 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HERVK_113P62684 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.43■□□□□ 0.7
HERVK_113P62684 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
HERVK_113P62684 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.43■□□□□ 0.7
HERVK_113P62684 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERVK_113P62684 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERVK_113P62684 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HERVK_113P62684 AC084018.2-201ENST00000613093 2607 ntBASIC19.42■□□□□ 0.7
HERVK_113P62684 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.42■□□□□ 0.7
HERVK_113P62684 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HERVK_113P62684 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.42■□□□□ 0.7
HERVK_113P62684 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERVK_113P62684 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.42■□□□□ 0.7
HERVK_113P62684 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERVK_113P62684 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HERVK_113P62684 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERVK_113P62684 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERVK_113P62684 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.42■□□□□ 0.7
HERVK_113P62684 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
HERVK_113P62684 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
HERVK_113P62684 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERVK_113P62684 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERVK_113P62684 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HERVK_113P62684 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.42■□□□□ 0.7
HERVK_113P62684 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HERVK_113P62684 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.42■□□□□ 0.7
HERVK_113P62684 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.42■□□□□ 0.7
HERVK_113P62684 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERVK_113P62684 AC016027.1-202ENST00000607927 1699 ntBASIC19.42■□□□□ 0.7
HERVK_113P62684 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HERVK_113P62684 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.42■□□□□ 0.7
HERVK_113P62684 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.42■□□□□ 0.7
HERVK_113P62684 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HERVK_113P62684 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERVK_113P62684 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HERVK_113P62684 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERVK_113P62684 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERVK_113P62684 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HERVK_113P62684 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HERVK_113P62684 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.41■□□□□ 0.7
HERVK_113P62684 AC092580.3-201ENST00000430932 139 ntBASIC19.41■□□□□ 0.7
HERVK_113P62684 AL512638.1-201ENST00000457493 794 ntBASIC19.41■□□□□ 0.7
HERVK_113P62684 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.41■□□□□ 0.7
HERVK_113P62684 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERVK_113P62684 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.41■□□□□ 0.7
HERVK_113P62684 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.41■□□□□ 0.7
HERVK_113P62684 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.41■□□□□ 0.7
HERVK_113P62684 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERVK_113P62684 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HERVK_113P62684 AC063926.2-201ENST00000623766 1308 ntBASIC19.41■□□□□ 0.7
HERVK_113P62684 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERVK_113P62684 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERVK_113P62684 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.41■□□□□ 0.7
HERVK_113P62684 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERVK_113P62684 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERVK_113P62684 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERVK_113P62684 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERVK_113P62684 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.41■□□□□ 0.7
HERVK_113P62684 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.41■□□□□ 0.7
HERVK_113P62684 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERVK_113P62684 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.41■□□□□ 0.7
HERVK_113P62684 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.41■□□□□ 0.7
HERVK_113P62684 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.41■□□□□ 0.7
HERVK_113P62684 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HERVK_113P62684 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.4■□□□□ 0.7
HERVK_113P62684 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERVK_113P62684 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERVK_113P62684 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HERVK_113P62684 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HERVK_113P62684 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HERVK_113P62684 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.4■□□□□ 0.7
HERVK_113P62684 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.4■□□□□ 0.7
HERVK_113P62684 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.4■□□□□ 0.7
HERVK_113P62684 AC005225.4-201ENST00000557330 545 ntBASIC19.4■□□□□ 0.7
HERVK_113P62684 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HERVK_113P62684 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HERVK_113P62684 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HERVK_113P62684 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERVK_113P62684 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HERVK_113P62684 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HERVK_113P62684 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
HERVK_113P62684 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HERVK_113P62684 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
HERVK_113P62684 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HERVK_113P62684 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms