Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.64■□□□□ 0.09
PER3P56645 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PER3P56645 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.64■□□□□ 0.09
PER3P56645 AC004817.3-201ENST00000602957 2129 ntBASIC15.64■□□□□ 0.09
PER3P56645 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.63■□□□□ 0.09
PER3P56645 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.63■□□□□ 0.09
PER3P56645 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.63■□□□□ 0.09
PER3P56645 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PER3P56645 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.63■□□□□ 0.09
PER3P56645 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.63■□□□□ 0.09
PER3P56645 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.63■□□□□ 0.09
PER3P56645 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.63■□□□□ 0.09
PER3P56645 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.63■□□□□ 0.09
PER3P56645 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PER3P56645 MRPL20P1-201ENST00000400819 433 ntBASIC15.63■□□□□ 0.09
PER3P56645 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.63■□□□□ 0.09
PER3P56645 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.63■□□□□ 0.09
PER3P56645 DDX43P3-201ENST00000441064 443 ntBASIC15.63■□□□□ 0.09
PER3P56645 RPS15P9-201ENST00000494093 319 ntBASIC15.63■□□□□ 0.09
PER3P56645 IGHV3-65-201ENST00000523210 341 ntBASIC15.63■□□□□ 0.09
PER3P56645 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.63■□□□□ 0.09
PER3P56645 AC109462.3-201ENST00000573934 613 ntBASIC15.63■□□□□ 0.09
PER3P56645 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
PER3P56645 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PER3P56645 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.63■□□□□ 0.09
PER3P56645 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.63■□□□□ 0.09
PER3P56645 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.63■□□□□ 0.09
PER3P56645 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.63■□□□□ 0.09
PER3P56645 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PER3P56645 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.63■□□□□ 0.09
PER3P56645 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.63■□□□□ 0.09
PER3P56645 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PER3P56645 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PER3P56645 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PER3P56645 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PER3P56645 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.62■□□□□ 0.09
PER3P56645 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PER3P56645 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.62■□□□□ 0.09
PER3P56645 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.62■□□□□ 0.09
PER3P56645 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 AC003669.1-201ENST00000334569 611 ntBASIC15.62■□□□□ 0.09
PER3P56645 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.62■□□□□ 0.09
PER3P56645 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PER3P56645 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.62■□□□□ 0.09
PER3P56645 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PER3P56645 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.62■□□□□ 0.09
PER3P56645 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
PER3P56645 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.62■□□□□ 0.09
PER3P56645 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.62■□□□□ 0.09
PER3P56645 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PER3P56645 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 PDPK2P-202ENST00000562415 1191 ntBASIC15.62■□□□□ 0.09
PER3P56645 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.62■□□□□ 0.09
PER3P56645 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
PER3P56645 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.62■□□□□ 0.09
PER3P56645 AL096865.1-201ENST00000606796 927 ntBASIC15.62■□□□□ 0.09
PER3P56645 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.62■□□□□ 0.09
PER3P56645 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
PER3P56645 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.62■□□□□ 0.09
PER3P56645 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
PER3P56645 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.62■□□□□ 0.09
PER3P56645 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
PER3P56645 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.62■□□□□ 0.09
PER3P56645 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms