Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 AC021097.1-201ENST00000607902 574 ntBASIC18.36■□□□□ 0.53
NCKAP1LP55160 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 RPSAP43-201ENST00000402237 625 ntBASIC18.35■□□□□ 0.53
NCKAP1LP55160 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 GPX1P2-201ENST00000429271 606 ntBASIC18.35■□□□□ 0.53
NCKAP1LP55160 FAM58CP-201ENST00000435741 640 ntBASIC18.35■□□□□ 0.53
NCKAP1LP55160 MKNK2P1-201ENST00000437526 628 ntBASIC18.35■□□□□ 0.53
NCKAP1LP55160 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 AL078644.1-201ENST00000609881 752 ntBASIC18.35■□□□□ 0.53
NCKAP1LP55160 AC023511.2-201ENST00000618803 211 ntBASIC18.35■□□□□ 0.53
NCKAP1LP55160 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 AC092902.6-201ENST00000641783 218 ntBASIC18.35■□□□□ 0.53
NCKAP1LP55160 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 AL031731.1-201ENST00000642131 2094 ntBASIC18.35■□□□□ 0.53
NCKAP1LP55160 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.35■□□□□ 0.53
NCKAP1LP55160 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1LP55160 GGT4P-201ENST00000623672 1708 ntBASIC18.35■□□□□ 0.53
NCKAP1LP55160 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1LP55160 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NCKAP1LP55160 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.34■□□□□ 0.53
NCKAP1LP55160 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1LP55160 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1LP55160 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.34■□□□□ 0.53
NCKAP1LP55160 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NCKAP1LP55160 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1LP55160 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1LP55160 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.34■□□□□ 0.53
NCKAP1LP55160 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1LP55160 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1LP55160 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1LP55160 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1LP55160 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.34■□□□□ 0.53
NCKAP1LP55160 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.34■□□□□ 0.53
NCKAP1LP55160 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NCKAP1LP55160 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.34■□□□□ 0.53
NCKAP1LP55160 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.34■□□□□ 0.53
NCKAP1LP55160 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1LP55160 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1LP55160 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NCKAP1LP55160 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1LP55160 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1LP55160 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1LP55160 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NCKAP1LP55160 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
NCKAP1LP55160 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCKAP1LP55160 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
NCKAP1LP55160 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCKAP1LP55160 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCKAP1LP55160 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
NCKAP1LP55160 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.33■□□□□ 0.53
NCKAP1LP55160 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
NCKAP1LP55160 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCKAP1LP55160 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.33■□□□□ 0.52
NCKAP1LP55160 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.33■□□□□ 0.52
NCKAP1LP55160 UPF3AP3-201ENST00000420996 769 ntBASIC18.33■□□□□ 0.52
NCKAP1LP55160 ADH5P3-201ENST00000433842 1137 ntBASIC18.33■□□□□ 0.52
NCKAP1LP55160 AC092865.5-201ENST00000545435 363 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms