Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ACLYP53396 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.36■□□□□ 0.53
ACLYP53396 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ACLYP53396 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.35■□□□□ 0.53
ACLYP53396 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ACLYP53396 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ACLYP53396 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ACLYP53396 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.35■□□□□ 0.53
ACLYP53396 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 AC079776.1-201ENST00000401540 1152 ntBASIC18.35■□□□□ 0.53
ACLYP53396 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.35■□□□□ 0.53
ACLYP53396 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 AC011495.1-201ENST00000498085 584 ntBASIC18.35■□□□□ 0.53
ACLYP53396 AC093004.1-201ENST00000508850 424 ntBASIC18.35■□□□□ 0.53
ACLYP53396 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.35■□□□□ 0.53
ACLYP53396 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.35■□□□□ 0.53
ACLYP53396 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.35■□□□□ 0.53
ACLYP53396 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.35■□□□□ 0.53
ACLYP53396 AL671710.1-201ENST00000610245 2349 ntBASIC18.35■□□□□ 0.53
ACLYP53396 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.35■□□□□ 0.53
ACLYP53396 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ACLYP53396 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACLYP53396 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.35■□□□□ 0.53
ACLYP53396 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ACLYP53396 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACLYP53396 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACLYP53396 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACLYP53396 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACLYP53396 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ACLYP53396 AC135050.7-201ENST00000624508 2218 ntBASIC18.34■□□□□ 0.53
ACLYP53396 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ACLYP53396 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
ACLYP53396 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACLYP53396 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACLYP53396 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.34■□□□□ 0.53
ACLYP53396 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.34■□□□□ 0.53
ACLYP53396 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACLYP53396 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ACLYP53396 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACLYP53396 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ACLYP53396 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.34■□□□□ 0.53
ACLYP53396 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.34■□□□□ 0.53
ACLYP53396 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.34■□□□□ 0.53
ACLYP53396 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.34■□□□□ 0.53
ACLYP53396 ACA64.2-201ENST00000459014 129 ntBASIC18.34■□□□□ 0.53
ACLYP53396 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ACLYP53396 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.34■□□□□ 0.53
ACLYP53396 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.34■□□□□ 0.53
ACLYP53396 AL512361.1-201ENST00000554200 418 ntBASIC18.34■□□□□ 0.53
ACLYP53396 WASH4P-201ENST00000564273 1246 ntBASIC18.34■□□□□ 0.53
ACLYP53396 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.34■□□□□ 0.53
ACLYP53396 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.34■□□□□ 0.53
ACLYP53396 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACLYP53396 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACLYP53396 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACLYP53396 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACLYP53396 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ACLYP53396 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ACLYP53396 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
ACLYP53396 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ACLYP53396 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ACLYP53396 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ACLYP53396 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.33■□□□□ 0.53
ACLYP53396 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
ACLYP53396 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ACLYP53396 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ACLYP53396 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ACLYP53396 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ACLYP53396 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
ACLYP53396 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ACLYP53396 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.33■□□□□ 0.52
ACLYP53396 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.33■□□□□ 0.52
ACLYP53396 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
ACLYP53396 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.33■□□□□ 0.52
ACLYP53396 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.33■□□□□ 0.52
ACLYP53396 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.33■□□□□ 0.52
ACLYP53396 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ACLYP53396 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.33■□□□□ 0.52
ACLYP53396 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.33■□□□□ 0.52
ACLYP53396 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.33■□□□□ 0.52
ACLYP53396 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.33■□□□□ 0.52
ACLYP53396 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ACLYP53396 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ACLYP53396 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.33■□□□□ 0.52
ACLYP53396 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ACLYP53396 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms