Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MIR5100-201ENST00000579544 119 ntBASIC15.36■□□□□ 0.05
HMGA2P52926 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA2P52926 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HMGA2P52926 AC010491.1-201ENST00000563101 2797 ntBASIC15.36■□□□□ 0.05
HMGA2P52926 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.36■□□□□ 0.05
HMGA2P52926 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA2P52926 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
HMGA2P52926 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA2P52926 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.36■□□□□ 0.05
HMGA2P52926 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.36■□□□□ 0.05
HMGA2P52926 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA2P52926 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA2P52926 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA2P52926 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA2P52926 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.36■□□□□ 0.05
HMGA2P52926 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA2P52926 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA2P52926 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA2P52926 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA2P52926 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.36■□□□□ 0.05
HMGA2P52926 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA2P52926 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HMGA2P52926 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 AP005117.1-201ENST00000584346 1413 ntBASIC15.35■□□□□ 0.05
HMGA2P52926 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGA2P52926 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.35■□□□□ 0.05
HMGA2P52926 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HMGA2P52926 LINC01144-201ENST00000626198 1710 ntBASIC15.35■□□□□ 0.05
HMGA2P52926 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 LINC00554-201ENST00000564841 3011 ntBASIC15.35■□□□□ 0.05
HMGA2P52926 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGA2P52926 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGA2P52926 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGA2P52926 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.35■□□□□ 0.05
HMGA2P52926 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGA2P52926 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.35■□□□□ 0.05
HMGA2P52926 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGA2P52926 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGA2P52926 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGA2P52926 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
HMGA2P52926 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HMGA2P52926 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HMGA2P52926 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGA2P52926 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HMGA2P52926 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGA2P52926 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA2P52926 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGA2P52926 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.34■□□□□ 0.05
HMGA2P52926 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGA2P52926 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HMGA2P52926 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGA2P52926 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGA2P52926 AC126177.1-201ENST00000547829 2218 ntBASIC15.34■□□□□ 0.05
HMGA2P52926 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.34■□□□□ 0.05
HMGA2P52926 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGA2P52926 RCN1P1-201ENST00000400413 996 ntBASIC15.34■□□□□ 0.05
HMGA2P52926 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGA2P52926 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.34■□□□□ 0.05
HMGA2P52926 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGA2P52926 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGA2P52926 RN7SL850P-201ENST00000579959 291 ntBASIC15.34■□□□□ 0.05
HMGA2P52926 AP002414.4-201ENST00000589764 1148 ntBASIC15.34■□□□□ 0.05
HMGA2P52926 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.34■□□□□ 0.05
HMGA2P52926 REXO1L3P-201ENST00000622202 1288 ntBASIC15.34■□□□□ 0.05
HMGA2P52926 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HMGA2P52926 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
HMGA2P52926 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGA2P52926 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HMGA2P52926 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms