Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CHKAP35790 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.78■□□□□ 0.44
CHKAP35790 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CHKAP35790 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHKAP35790 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHKAP35790 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHKAP35790 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CHKAP35790 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHKAP35790 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHKAP35790 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHKAP35790 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHKAP35790 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHKAP35790 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHKAP35790 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHKAP35790 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHKAP35790 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.77■□□□□ 0.44
CHKAP35790 AC004832.2-201ENST00000426397 482 ntBASIC17.77■□□□□ 0.44
CHKAP35790 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.77■□□□□ 0.44
CHKAP35790 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.77■□□□□ 0.44
CHKAP35790 DNAJB3-201ENST00000446806 729 ntBASIC17.77■□□□□ 0.44
CHKAP35790 HCG4B-203ENST00000450128 991 ntBASIC17.77■□□□□ 0.44
CHKAP35790 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.77■□□□□ 0.44
CHKAP35790 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.77■□□□□ 0.44
CHKAP35790 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CHKAP35790 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.77■□□□□ 0.44
CHKAP35790 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.77■□□□□ 0.44
CHKAP35790 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHKAP35790 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHKAP35790 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
CHKAP35790 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
CHKAP35790 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.77■□□□□ 0.43
CHKAP35790 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CHKAP35790 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.77■□□□□ 0.43
CHKAP35790 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
CHKAP35790 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CHKAP35790 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CHKAP35790 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.76■□□□□ 0.43
CHKAP35790 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHKAP35790 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHKAP35790 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.76■□□□□ 0.43
CHKAP35790 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.76■□□□□ 0.43
CHKAP35790 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHKAP35790 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHKAP35790 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHKAP35790 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHKAP35790 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CHKAP35790 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHKAP35790 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.76■□□□□ 0.43
CHKAP35790 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.76■□□□□ 0.43
CHKAP35790 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.76■□□□□ 0.43
CHKAP35790 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.76■□□□□ 0.43
CHKAP35790 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.76■□□□□ 0.43
CHKAP35790 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.76■□□□□ 0.43
CHKAP35790 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHKAP35790 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHKAP35790 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHKAP35790 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.76■□□□□ 0.43
CHKAP35790 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHKAP35790 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CHKAP35790 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CHKAP35790 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CHKAP35790 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.75■□□□□ 0.43
CHKAP35790 PKD1P1-201ENST00000458669 6805 ntBASIC17.75■□□□□ 0.43
CHKAP35790 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.75■□□□□ 0.43
CHKAP35790 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.75■□□□□ 0.43
CHKAP35790 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.75■□□□□ 0.43
CHKAP35790 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CHKAP35790 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 MIR1233-2-201ENST00000408138 82 ntBASIC17.75■□□□□ 0.43
CHKAP35790 MIR1233-1-201ENST00000408722 82 ntBASIC17.75■□□□□ 0.43
CHKAP35790 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.75■□□□□ 0.43
CHKAP35790 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.75■□□□□ 0.43
CHKAP35790 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.75■□□□□ 0.43
CHKAP35790 KRT18P2-201ENST00000447938 1258 ntBASIC17.75■□□□□ 0.43
CHKAP35790 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CHKAP35790 MTDHP5-201ENST00000598980 586 ntBASIC17.75■□□□□ 0.43
CHKAP35790 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.75■□□□□ 0.43
CHKAP35790 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.75■□□□□ 0.43
CHKAP35790 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms