Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 PCDHA1-201ENST00000378133 2726 ntBASIC18.8■□□□□ 0.6
CASP1P29466 CICP6-201ENST00000457191 2729 ntBASIC18.8■□□□□ 0.6
CASP1P29466 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP1P29466 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CASP1P29466 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP1P29466 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CASP1P29466 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP1P29466 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.8■□□□□ 0.6
CASP1P29466 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.8■□□□□ 0.6
CASP1P29466 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP1P29466 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.8■□□□□ 0.6
CASP1P29466 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP1P29466 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.8■□□□□ 0.6
CASP1P29466 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CASP1P29466 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.8■□□□□ 0.6
CASP1P29466 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
CASP1P29466 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.8■□□□□ 0.6
CASP1P29466 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.8■□□□□ 0.6
CASP1P29466 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CASP1P29466 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.8■□□□□ 0.6
CASP1P29466 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CASP1P29466 MIR4492-201ENST00000581627 80 ntBASIC18.8■□□□□ 0.6
CASP1P29466 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.8■□□□□ 0.6
CASP1P29466 MPDU1-223ENST00000582151 728 ntBASIC18.8■□□□□ 0.6
CASP1P29466 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.8■□□□□ 0.6
CASP1P29466 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.8■□□□□ 0.6
CASP1P29466 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CASP1P29466 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP1P29466 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP1P29466 AL512652.2-201ENST00000625156 1716 ntBASIC18.8■□□□□ 0.6
CASP1P29466 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.8■□□□□ 0.6
CASP1P29466 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASP1P29466 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.79■□□□□ 0.6
CASP1P29466 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CASP1P29466 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
CASP1P29466 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.79■□□□□ 0.6
CASP1P29466 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.79■□□□□ 0.6
CASP1P29466 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.79■□□□□ 0.6
CASP1P29466 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CASP1P29466 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.79■□□□□ 0.6
CASP1P29466 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.79■□□□□ 0.6
CASP1P29466 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.79■□□□□ 0.6
CASP1P29466 AC008735.5-201ENST00000623544 497 ntBASIC18.79■□□□□ 0.6
CASP1P29466 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CASP1P29466 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CASP1P29466 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.79■□□□□ 0.6
CASP1P29466 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.79■□□□□ 0.6
CASP1P29466 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.79■□□□□ 0.6
CASP1P29466 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CASP1P29466 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 AL391005.1-201ENST00000623953 2435 ntBASIC18.79■□□□□ 0.6
CASP1P29466 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP1P29466 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.78■□□□□ 0.6
CASP1P29466 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.78■□□□□ 0.6
CASP1P29466 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CASP1P29466 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CASP1P29466 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.78■□□□□ 0.6
CASP1P29466 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.78■□□□□ 0.6
CASP1P29466 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.78■□□□□ 0.6
CASP1P29466 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.78■□□□□ 0.6
CASP1P29466 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 AC136632.2-201ENST00000512891 861 ntBASIC18.78■□□□□ 0.6
CASP1P29466 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CASP1P29466 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CASP1P29466 AC104692.2-201ENST00000603054 253 ntBASIC18.78■□□□□ 0.6
CASP1P29466 AF228730.7-201ENST00000641842 219 ntBASIC18.78■□□□□ 0.6
CASP1P29466 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP1P29466 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.78■□□□□ 0.6
CASP1P29466 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms