Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CD40P25942 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.47□□□□□ -0.09
CD40P25942 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.47□□□□□ -0.09
CD40P25942 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CD40P25942 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
CD40P25942 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CD40P25942 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.47□□□□□ -0.09
CD40P25942 AC005237.2-201ENST00000434368 219 ntBASIC14.47□□□□□ -0.09
CD40P25942 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.47□□□□□ -0.09
CD40P25942 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.47□□□□□ -0.09
CD40P25942 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CD40P25942 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.47□□□□□ -0.09
CD40P25942 AC243562.1-201ENST00000560672 389 ntBASIC14.47□□□□□ -0.09
CD40P25942 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.47□□□□□ -0.09
CD40P25942 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CD40P25942 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.47□□□□□ -0.09
CD40P25942 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CD40P25942 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.47□□□□□ -0.09
CD40P25942 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.47□□□□□ -0.09
CD40P25942 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CD40P25942 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.46□□□□□ -0.09
CD40P25942 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CD40P25942 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.46□□□□□ -0.09
CD40P25942 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.46□□□□□ -0.09
CD40P25942 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.46□□□□□ -0.09
CD40P25942 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
CD40P25942 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CD40P25942 AL627223.1-201ENST00000416693 442 ntBASIC14.46□□□□□ -0.09
CD40P25942 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.46□□□□□ -0.09
CD40P25942 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.46□□□□□ -0.09
CD40P25942 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.46□□□□□ -0.09
CD40P25942 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.46□□□□□ -0.09
CD40P25942 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.46□□□□□ -0.09
CD40P25942 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.46□□□□□ -0.09
CD40P25942 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.46□□□□□ -0.09
CD40P25942 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.09
CD40P25942 AC021097.1-201ENST00000607902 574 ntBASIC14.46□□□□□ -0.09
CD40P25942 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CD40P25942 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CD40P25942 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.46□□□□□ -0.09
CD40P25942 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.46□□□□□ -0.09
CD40P25942 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CD40P25942 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD40P25942 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CD40P25942 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CD40P25942 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.46□□□□□ -0.1
CD40P25942 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.46□□□□□ -0.1
CD40P25942 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD40P25942 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD40P25942 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD40P25942 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
CD40P25942 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CD40P25942 LETM1P2-201ENST00000597330 2178 ntBASIC14.46□□□□□ -0.1
CD40P25942 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD40P25942 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD40P25942 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CD40P25942 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD40P25942 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.45□□□□□ -0.1
CD40P25942 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 AC006277.1-201ENST00000624348 1610 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms