Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.84■□□□□ 0.61
COL11A1P12107 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
COL11A1P12107 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL11A1P12107 AL512652.2-201ENST00000625156 1716 ntBASIC18.84■□□□□ 0.61
COL11A1P12107 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
COL11A1P12107 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.84■□□□□ 0.61
COL11A1P12107 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL11A1P12107 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.84■□□□□ 0.61
COL11A1P12107 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL11A1P12107 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL11A1P12107 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL11A1P12107 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL11A1P12107 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL11A1P12107 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.84■□□□□ 0.61
COL11A1P12107 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.84■□□□□ 0.61
COL11A1P12107 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.84■□□□□ 0.61
COL11A1P12107 GAPDHP21-201ENST00000450301 1010 ntBASIC18.84■□□□□ 0.61
COL11A1P12107 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.84■□□□□ 0.61
COL11A1P12107 HLA-V-204ENST00000476601 1289 ntBASIC18.84■□□□□ 0.61
COL11A1P12107 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.83■□□□□ 0.61
COL11A1P12107 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL11A1P12107 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL11A1P12107 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
COL11A1P12107 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
COL11A1P12107 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
COL11A1P12107 AL035456.1-201ENST00000456064 1369 ntBASIC18.83■□□□□ 0.61
COL11A1P12107 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL11A1P12107 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
COL11A1P12107 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.83■□□□□ 0.61
COL11A1P12107 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
COL11A1P12107 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL11A1P12107 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL11A1P12107 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL11A1P12107 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL11A1P12107 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL11A1P12107 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.83■□□□□ 0.6
COL11A1P12107 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL11A1P12107 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL11A1P12107 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
COL11A1P12107 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL11A1P12107 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
COL11A1P12107 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.83■□□□□ 0.6
COL11A1P12107 AC140912.1-201ENST00000577171 1054 ntBASIC18.83■□□□□ 0.6
COL11A1P12107 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.83■□□□□ 0.6
COL11A1P12107 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL11A1P12107 AL589739.1-201ENST00000607720 493 ntBASIC18.83■□□□□ 0.6
COL11A1P12107 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL11A1P12107 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL11A1P12107 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL11A1P12107 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL11A1P12107 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.83■□□□□ 0.6
COL11A1P12107 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL11A1P12107 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.83■□□□□ 0.6
COL11A1P12107 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL11A1P12107 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL11A1P12107 AC087499.5-201ENST00000452760 1342 ntBASIC18.82■□□□□ 0.6
COL11A1P12107 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
COL11A1P12107 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL11A1P12107 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL11A1P12107 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.82■□□□□ 0.6
COL11A1P12107 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL11A1P12107 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.82■□□□□ 0.6
COL11A1P12107 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.82■□□□□ 0.6
COL11A1P12107 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.82■□□□□ 0.6
COL11A1P12107 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL11A1P12107 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.82■□□□□ 0.6
COL11A1P12107 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.82■□□□□ 0.6
COL11A1P12107 AC004233.3-201ENST00000607794 1269 ntBASIC18.82■□□□□ 0.6
COL11A1P12107 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COL11A1P12107 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL11A1P12107 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL11A1P12107 SLC7A15P-201ENST00000424028 1363 ntBASIC18.82■□□□□ 0.6
COL11A1P12107 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.82■□□□□ 0.6
COL11A1P12107 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.82■□□□□ 0.6
COL11A1P12107 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL11A1P12107 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.82■□□□□ 0.6
COL11A1P12107 AL023806.1-201ENST00000603994 1649 ntBASIC18.82■□□□□ 0.6
COL11A1P12107 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COL11A1P12107 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COL11A1P12107 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.82■□□□□ 0.6
COL11A1P12107 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COL11A1P12107 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.82■□□□□ 0.6
COL11A1P12107 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL11A1P12107 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COL11A1P12107 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL11A1P12107 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL11A1P12107 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.82■□□□□ 0.6
COL11A1P12107 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
COL11A1P12107 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
COL11A1P12107 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
COL11A1P12107 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.81■□□□□ 0.6
COL11A1P12107 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.81■□□□□ 0.6
COL11A1P12107 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 AL596325.1-201ENST00000563991 1082 ntBASIC18.81■□□□□ 0.6
COL11A1P12107 AC009407.1-201ENST00000568958 598 ntBASIC18.81■□□□□ 0.6
COL11A1P12107 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms