Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
THRAP10827 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
THRAP10827 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.94■□□□□ 0.3
THRAP10827 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.94■□□□□ 0.3
THRAP10827 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
THRAP10827 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
THRAP10827 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.93■□□□□ 0.3
THRAP10827 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
THRAP10827 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
THRAP10827 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
THRAP10827 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
THRAP10827 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.93■□□□□ 0.3
THRAP10827 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
THRAP10827 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
THRAP10827 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.93■□□□□ 0.3
THRAP10827 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.93■□□□□ 0.3
THRAP10827 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.93■□□□□ 0.3
THRAP10827 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.93■□□□□ 0.3
THRAP10827 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.93■□□□□ 0.3
THRAP10827 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.93■□□□□ 0.3
THRAP10827 MIR1233-2-201ENST00000408138 82 ntBASIC16.93■□□□□ 0.3
THRAP10827 MIR1233-1-201ENST00000408722 82 ntBASIC16.93■□□□□ 0.3
THRAP10827 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.93■□□□□ 0.3
THRAP10827 UNC93B6-202ENST00000528242 690 ntBASIC16.93■□□□□ 0.3
THRAP10827 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.93■□□□□ 0.3
THRAP10827 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
THRAP10827 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.93■□□□□ 0.3
THRAP10827 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.93■□□□□ 0.3
THRAP10827 AC006557.2-201ENST00000592985 1240 ntBASIC16.93■□□□□ 0.3
THRAP10827 AL356488.2-201ENST00000602755 427 ntBASIC16.93■□□□□ 0.3
THRAP10827 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
THRAP10827 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
THRAP10827 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
THRAP10827 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
THRAP10827 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
THRAP10827 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.93■□□□□ 0.3
THRAP10827 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
THRAP10827 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
THRAP10827 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.93■□□□□ 0.3
THRAP10827 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.93■□□□□ 0.3
THRAP10827 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.93■□□□□ 0.3
THRAP10827 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.93■□□□□ 0.3
THRAP10827 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.93■□□□□ 0.3
THRAP10827 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
THRAP10827 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
THRAP10827 AL353593.2-201ENST00000602529 1483 ntBASIC16.93■□□□□ 0.3
THRAP10827 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.92■□□□□ 0.3
THRAP10827 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
THRAP10827 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.92■□□□□ 0.3
THRAP10827 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.92■□□□□ 0.3
THRAP10827 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
THRAP10827 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
THRAP10827 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.92■□□□□ 0.3
THRAP10827 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 KRT18P27-201ENST00000427733 1299 ntBASIC16.92■□□□□ 0.3
THRAP10827 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.92■□□□□ 0.3
THRAP10827 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.92■□□□□ 0.3
THRAP10827 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.92■□□□□ 0.3
THRAP10827 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
THRAP10827 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
THRAP10827 AC004817.3-201ENST00000602957 2129 ntBASIC16.92■□□□□ 0.3
THRAP10827 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
THRAP10827 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.92■□□□□ 0.3
THRAP10827 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
THRAP10827 AC026691.1-201ENST00000602502 2017 ntBASIC16.92■□□□□ 0.3
THRAP10827 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.92■□□□□ 0.3
THRAP10827 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
THRAP10827 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THRAP10827 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THRAP10827 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THRAP10827 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THRAP10827 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
THRAP10827 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
THRAP10827 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
THRAP10827 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
THRAP10827 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THRAP10827 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.91■□□□□ 0.3
THRAP10827 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THRAP10827 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms