Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SP9P0CG40 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.34■□□□□ 0.21
SP9P0CG40 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SP9P0CG40 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SP9P0CG40 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SP9P0CG40 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SP9P0CG40 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SP9P0CG40 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.34■□□□□ 0.21
SP9P0CG40 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SP9P0CG40 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SP9P0CG40 PFN1P12-201ENST00000455938 534 ntBASIC16.34■□□□□ 0.21
SP9P0CG40 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.34■□□□□ 0.21
SP9P0CG40 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.34■□□□□ 0.21
SP9P0CG40 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SP9P0CG40 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.34■□□□□ 0.21
SP9P0CG40 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.34■□□□□ 0.21
SP9P0CG40 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.34■□□□□ 0.21
SP9P0CG40 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
SP9P0CG40 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SP9P0CG40 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SP9P0CG40 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SP9P0CG40 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SP9P0CG40 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SP9P0CG40 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.34■□□□□ 0.21
SP9P0CG40 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
SP9P0CG40 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SP9P0CG40 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SP9P0CG40 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SP9P0CG40 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SP9P0CG40 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SP9P0CG40 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SP9P0CG40 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SP9P0CG40 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SP9P0CG40 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.33■□□□□ 0.21
SP9P0CG40 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SP9P0CG40 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.33■□□□□ 0.2
SP9P0CG40 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.33■□□□□ 0.2
SP9P0CG40 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.33■□□□□ 0.2
SP9P0CG40 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SP9P0CG40 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
SP9P0CG40 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.33■□□□□ 0.2
SP9P0CG40 AC024267.1-201ENST00000582320 895 ntBASIC16.33■□□□□ 0.2
SP9P0CG40 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.33■□□□□ 0.2
SP9P0CG40 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.33■□□□□ 0.2
SP9P0CG40 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.33■□□□□ 0.2
SP9P0CG40 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.33■□□□□ 0.2
SP9P0CG40 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SP9P0CG40 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SP9P0CG40 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SP9P0CG40 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SP9P0CG40 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
SP9P0CG40 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.32■□□□□ 0.2
SP9P0CG40 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.32■□□□□ 0.2
SP9P0CG40 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.32■□□□□ 0.2
SP9P0CG40 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SP9P0CG40 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.32■□□□□ 0.2
SP9P0CG40 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.32■□□□□ 0.2
SP9P0CG40 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.32■□□□□ 0.2
SP9P0CG40 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SP9P0CG40 TIMM17BP1-201ENST00000545713 516 ntBASIC16.32■□□□□ 0.2
SP9P0CG40 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.32■□□□□ 0.2
SP9P0CG40 RARRES2P5-201ENST00000564013 466 ntBASIC16.32■□□□□ 0.2
SP9P0CG40 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.32■□□□□ 0.2
SP9P0CG40 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.32■□□□□ 0.2
SP9P0CG40 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.32■□□□□ 0.2
SP9P0CG40 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SP9P0CG40 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SP9P0CG40 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.31■□□□□ 0.2
SP9P0CG40 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SP9P0CG40 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms