Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC6P09630 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC6P09630 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC6P09630 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXC6P09630 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HOXC6P09630 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC6P09630 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC6P09630 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HOXC6P09630 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC6P09630 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC6P09630 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
HOXC6P09630 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HOXC6P09630 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC6P09630 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC6P09630 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC6P09630 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HOXC6P09630 U91328.1-201ENST00000437528 223 ntBASIC18.84■□□□□ 0.61
HOXC6P09630 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.84■□□□□ 0.61
HOXC6P09630 KRT17P7-201ENST00000451704 1104 ntBASIC18.84■□□□□ 0.61
HOXC6P09630 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HOXC6P09630 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC6P09630 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXC6P09630 BANF1P1-201ENST00000553684 263 ntBASIC18.84■□□□□ 0.61
HOXC6P09630 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXC6P09630 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
HOXC6P09630 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC6P09630 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC6P09630 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HOXC6P09630 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC6P09630 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC6P09630 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC6P09630 AC108860.2-201ENST00000562760 2183 ntBASIC18.83■□□□□ 0.61
HOXC6P09630 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC6P09630 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC6P09630 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
HOXC6P09630 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC6P09630 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC6P09630 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC6P09630 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
HOXC6P09630 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC6P09630 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC6P09630 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HOXC6P09630 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXC6P09630 ARSEP1-201ENST00000420443 635 ntBASIC18.83■□□□□ 0.6
HOXC6P09630 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.83■□□□□ 0.6
HOXC6P09630 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXC6P09630 AC098859.1-201ENST00000502915 1238 ntBASIC18.83■□□□□ 0.6
HOXC6P09630 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HOXC6P09630 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXC6P09630 AL589739.1-201ENST00000607720 493 ntBASIC18.83■□□□□ 0.6
HOXC6P09630 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC6P09630 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXC6P09630 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HOXC6P09630 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HOXC6P09630 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HOXC6P09630 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXC6P09630 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC6P09630 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC6P09630 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXC6P09630 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
HOXC6P09630 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC6P09630 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HOXC6P09630 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.83■□□□□ 0.6
HOXC6P09630 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC6P09630 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC6P09630 AC073439.1-201ENST00000624121 1774 ntBASIC18.83■□□□□ 0.6
HOXC6P09630 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXC6P09630 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXC6P09630 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
HOXC6P09630 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC6P09630 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC6P09630 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HOXC6P09630 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC6P09630 AL138688.1-201ENST00000624851 1594 ntBASIC18.82■□□□□ 0.6
HOXC6P09630 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HOXC6P09630 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC6P09630 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC6P09630 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC6P09630 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
HOXC6P09630 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.82■□□□□ 0.6
HOXC6P09630 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 AL132655.2-201ENST00000596276 594 ntBASIC18.82■□□□□ 0.6
HOXC6P09630 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXC6P09630 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.82■□□□□ 0.6
HOXC6P09630 AL133215.2-201ENST00000609242 977 ntBASIC18.82■□□□□ 0.6
HOXC6P09630 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 AC004840.1-201ENST00000636359 365 ntBASIC18.82■□□□□ 0.6
HOXC6P09630 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms