Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTNP04004 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VTNP04004 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VTNP04004 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.35■□□□□ 0.53
VTNP04004 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTNP04004 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.35■□□□□ 0.53
VTNP04004 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.35■□□□□ 0.53
VTNP04004 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VTNP04004 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTNP04004 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
VTNP04004 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTNP04004 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTNP04004 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.35■□□□□ 0.53
VTNP04004 MIR346-201ENST00000362234 95 ntBASIC18.35■□□□□ 0.53
VTNP04004 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VTNP04004 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
VTNP04004 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.35■□□□□ 0.53
VTNP04004 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
VTNP04004 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.35■□□□□ 0.53
VTNP04004 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
VTNP04004 AC067863.1-201ENST00000494933 530 ntBASIC18.35■□□□□ 0.53
VTNP04004 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTNP04004 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VTNP04004 SPCS2P1-201ENST00000561636 679 ntBASIC18.35■□□□□ 0.53
VTNP04004 AC051619.7-201ENST00000568314 623 ntBASIC18.35■□□□□ 0.53
VTNP04004 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.35■□□□□ 0.53
VTNP04004 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTNP04004 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VTNP04004 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTNP04004 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.35■□□□□ 0.53
VTNP04004 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VTNP04004 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTNP04004 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTNP04004 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VTNP04004 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.34■□□□□ 0.53
VTNP04004 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.34■□□□□ 0.53
VTNP04004 OR6D1P-202ENST00000641007 5290 ntBASIC18.34■□□□□ 0.53
VTNP04004 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
VTNP04004 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.34■□□□□ 0.53
VTNP04004 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
VTNP04004 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VTNP04004 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VTNP04004 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
VTNP04004 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.34■□□□□ 0.53
VTNP04004 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
VTNP04004 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.34■□□□□ 0.53
VTNP04004 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.34■□□□□ 0.53
VTNP04004 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 FAM8A3P-201ENST00000427218 844 ntBASIC18.34■□□□□ 0.53
VTNP04004 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.34■□□□□ 0.53
VTNP04004 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.34■□□□□ 0.53
VTNP04004 ALG1L8P-201ENST00000533887 760 ntBASIC18.34■□□□□ 0.53
VTNP04004 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.34■□□□□ 0.53
VTNP04004 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.34■□□□□ 0.53
VTNP04004 AC013467.2-201ENST00000605472 835 ntBASIC18.34■□□□□ 0.53
VTNP04004 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.34■□□□□ 0.53
VTNP04004 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VTNP04004 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTNP04004 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
VTNP04004 AL645608.8-201ENST00000606034 2086 ntBASIC18.34■□□□□ 0.53
VTNP04004 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
VTNP04004 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.33■□□□□ 0.53
VTNP04004 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.33■□□□□ 0.53
VTNP04004 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
VTNP04004 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.33■□□□□ 0.53
VTNP04004 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VTNP04004 SNX33P1-201ENST00000592116 1762 ntBASIC18.33■□□□□ 0.53
VTNP04004 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
VTNP04004 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VTNP04004 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VTNP04004 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.33■□□□□ 0.52
VTNP04004 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.33■□□□□ 0.52
VTNP04004 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.33■□□□□ 0.52
VTNP04004 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.33■□□□□ 0.52
VTNP04004 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VTNP04004 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VTNP04004 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.33■□□□□ 0.52
VTNP04004 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.33■□□□□ 0.52
VTNP04004 BCRP1-201ENST00000444246 691 ntBASIC18.33■□□□□ 0.52
VTNP04004 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms