Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.71□□□□□ -0.37
LTAP01374 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LTAP01374 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
LTAP01374 AL353801.3-201ENST00000609898 542 ntBASIC12.71□□□□□ -0.37
LTAP01374 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.71□□□□□ -0.37
LTAP01374 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.71□□□□□ -0.37
LTAP01374 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.71□□□□□ -0.37
LTAP01374 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LTAP01374 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LTAP01374 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LTAP01374 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
LTAP01374 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LTAP01374 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LTAP01374 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
LTAP01374 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LTAP01374 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.71□□□□□ -0.38
LTAP01374 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LTAP01374 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
LTAP01374 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.71□□□□□ -0.38
LTAP01374 KRT8P49-201ENST00000604166 1432 ntBASIC12.71□□□□□ -0.38
LTAP01374 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
LTAP01374 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LTAP01374 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.71□□□□□ -0.38
LTAP01374 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.7□□□□□ -0.38
LTAP01374 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
LTAP01374 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LTAP01374 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 DBET-201ENST00000630918 3363 ntBASIC12.7□□□□□ -0.38
LTAP01374 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.7□□□□□ -0.38
LTAP01374 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LTAP01374 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.7□□□□□ -0.38
LTAP01374 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 AC006277.1-201ENST00000624348 1610 ntBASIC12.7□□□□□ -0.38
LTAP01374 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LTAP01374 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.7□□□□□ -0.38
LTAP01374 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.7□□□□□ -0.38
LTAP01374 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 HBZP1-201ENST00000354915 429 ntBASIC12.7□□□□□ -0.38
LTAP01374 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 TSPY15P-201ENST00000457163 923 ntBASIC12.7□□□□□ -0.38
LTAP01374 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.7□□□□□ -0.38
LTAP01374 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.7□□□□□ -0.38
LTAP01374 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.7□□□□□ -0.38
LTAP01374 AC005336.2-201ENST00000593183 939 ntBASIC12.7□□□□□ -0.38
LTAP01374 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.7□□□□□ -0.38
LTAP01374 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.7□□□□□ -0.38
LTAP01374 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
LTAP01374 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.7□□□□□ -0.38
LTAP01374 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.7□□□□□ -0.38
LTAP01374 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.7□□□□□ -0.38
LTAP01374 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LTAP01374 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.7□□□□□ -0.38
LTAP01374 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.7□□□□□ -0.38
LTAP01374 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LTAP01374 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LTAP01374 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LTAP01374 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LTAP01374 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LTAP01374 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.69□□□□□ -0.38
LTAP01374 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LTAP01374 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LTAP01374 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LTAP01374 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LTAP01374 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LTAP01374 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LTAP01374 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.69□□□□□ -0.38
LTAP01374 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LTAP01374 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.69□□□□□ -0.38
LTAP01374 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LTAP01374 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LTAP01374 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms