Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.73■□□□□ 0.91
SMARCA5O60264 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 PKD1P1-201ENST00000458669 6805 ntBASIC20.73■□□□□ 0.91
SMARCA5O60264 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SMARCA5O60264 AC006538.1-201ENST00000567905 1585 ntBASIC20.73■□□□□ 0.91
SMARCA5O60264 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCA5O60264 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.73■□□□□ 0.91
SMARCA5O60264 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SMARCA5O60264 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SMARCA5O60264 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
SMARCA5O60264 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SMARCA5O60264 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCA5O60264 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SMARCA5O60264 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SMARCA5O60264 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
SMARCA5O60264 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.72■□□□□ 0.91
SMARCA5O60264 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SMARCA5O60264 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.72■□□□□ 0.91
SMARCA5O60264 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.72■□□□□ 0.91
SMARCA5O60264 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.72■□□□□ 0.91
SMARCA5O60264 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.72■□□□□ 0.91
SMARCA5O60264 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.72■□□□□ 0.91
SMARCA5O60264 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.72■□□□□ 0.91
SMARCA5O60264 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.72■□□□□ 0.91
SMARCA5O60264 AC091167.2-201ENST00000579581 588 ntBASIC20.72■□□□□ 0.91
SMARCA5O60264 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.72■□□□□ 0.91
SMARCA5O60264 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.72■□□□□ 0.91
SMARCA5O60264 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.72■□□□□ 0.91
SMARCA5O60264 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SMARCA5O60264 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.72■□□□□ 0.91
SMARCA5O60264 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
SMARCA5O60264 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SMARCA5O60264 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCA5O60264 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCA5O60264 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCA5O60264 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCA5O60264 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SMARCA5O60264 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCA5O60264 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCA5O60264 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.71■□□□□ 0.91
SMARCA5O60264 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.71■□□□□ 0.91
SMARCA5O60264 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCA5O60264 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.71■□□□□ 0.91
SMARCA5O60264 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCA5O60264 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.71■□□□□ 0.91
SMARCA5O60264 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCA5O60264 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.71■□□□□ 0.91
SMARCA5O60264 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
SMARCA5O60264 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SMARCA5O60264 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCA5O60264 AC064836.3-201ENST00000607928 673 ntBASIC20.71■□□□□ 0.91
SMARCA5O60264 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.71■□□□□ 0.91
SMARCA5O60264 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.71■□□□□ 0.91
SMARCA5O60264 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SMARCA5O60264 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SMARCA5O60264 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCA5O60264 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
SMARCA5O60264 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
SMARCA5O60264 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCA5O60264 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCA5O60264 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SMARCA5O60264 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms