Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
ABCC4O15439 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC21.28■■□□□ 1
ABCC4O15439 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ABCC4O15439 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ABCC4O15439 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.28■■□□□ 1
ABCC4O15439 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ABCC4O15439 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21.28■■□□□ 1
ABCC4O15439 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
ABCC4O15439 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC21.28■■□□□ 1
ABCC4O15439 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
ABCC4O15439 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC21.28■■□□□ 1
ABCC4O15439 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
ABCC4O15439 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.28■■□□□ 1
ABCC4O15439 AL355306.1-201ENST00000415580 579 ntBASIC21.28■■□□□ 1
ABCC4O15439 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.28■■□□□ 1
ABCC4O15439 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ABCC4O15439 TIMM8BP1-201ENST00000452384 211 ntBASIC21.28■■□□□ 1
ABCC4O15439 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.28■■□□□ 1
ABCC4O15439 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.28■■□□□ 1
ABCC4O15439 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ABCC4O15439 MIR4515-201ENST00000584082 81 ntBASIC21.28■■□□□ 1
ABCC4O15439 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ABCC4O15439 UBALD1-205ENST00000590891 2641 ntBASIC21.28■■□□□ 1
ABCC4O15439 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC21.27■■□□□ 1
ABCC4O15439 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ABCC4O15439 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ABCC4O15439 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ABCC4O15439 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.27■■□□□ 1
ABCC4O15439 AL512652.2-201ENST00000625156 1716 ntBASIC21.27■■□□□ 1
ABCC4O15439 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ABCC4O15439 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
ABCC4O15439 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.27■■□□□ 1
ABCC4O15439 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ABCC4O15439 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
ABCC4O15439 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC21.27■■□□□ 1
ABCC4O15439 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.27■■□□□ 1
ABCC4O15439 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.27■■□□□ 1
ABCC4O15439 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
ABCC4O15439 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC21.27■■□□□ 1
ABCC4O15439 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC21.27■■□□□ 1
ABCC4O15439 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
ABCC4O15439 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
ABCC4O15439 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
ABCC4O15439 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ABCC4O15439 KRT8P39-201ENST00000396270 1433 ntBASIC21.27■□□□□ 0.99
ABCC4O15439 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ABCC4O15439 HMGA1P7-201ENST00000406908 502 ntBASIC21.27■□□□□ 0.99
ABCC4O15439 AL627223.1-201ENST00000416693 442 ntBASIC21.27■□□□□ 0.99
ABCC4O15439 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.27■□□□□ 0.99
ABCC4O15439 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ABCC4O15439 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.27■□□□□ 0.99
ABCC4O15439 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.27■□□□□ 0.99
ABCC4O15439 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.27■□□□□ 0.99
ABCC4O15439 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC21.27■□□□□ 0.99
ABCC4O15439 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.27■□□□□ 0.99
ABCC4O15439 AC099398.1-201ENST00000567919 2776 ntBASIC21.27■□□□□ 0.99
ABCC4O15439 AC005498.2-205ENST00000593218 784 ntBASIC21.27■□□□□ 0.99
ABCC4O15439 AL096865.1-201ENST00000606796 927 ntBASIC21.27■□□□□ 0.99
ABCC4O15439 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
ABCC4O15439 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
ABCC4O15439 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ABCC4O15439 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ABCC4O15439 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.26■□□□□ 0.99
ABCC4O15439 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
ABCC4O15439 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ABCC4O15439 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
ABCC4O15439 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ABCC4O15439 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ABCC4O15439 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ABCC4O15439 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ABCC4O15439 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ABCC4O15439 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ABCC4O15439 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.26■□□□□ 0.99
ABCC4O15439 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ABCC4O15439 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.26■□□□□ 0.99
ABCC4O15439 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ABCC4O15439 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.26■□□□□ 0.99
ABCC4O15439 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.26■□□□□ 0.99
ABCC4O15439 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ABCC4O15439 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
ABCC4O15439 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.26■□□□□ 0.99
ABCC4O15439 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.26■□□□□ 0.99
ABCC4O15439 AC009093.7-201ENST00000623853 1223 ntBASIC21.26■□□□□ 0.99
ABCC4O15439 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.26■□□□□ 0.99
ABCC4O15439 AC012569.1-201ENST00000591191 1524 ntBASIC21.26■□□□□ 0.99
ABCC4O15439 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ABCC4O15439 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ABCC4O15439 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ABCC4O15439 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ABCC4O15439 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.25■□□□□ 0.99
ABCC4O15439 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ABCC4O15439 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC21.25■□□□□ 0.99
ABCC4O15439 GGT4P-201ENST00000623672 1708 ntBASIC21.25■□□□□ 0.99
ABCC4O15439 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC21.25■□□□□ 0.99
ABCC4O15439 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.25■□□□□ 0.99
ABCC4O15439 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ABCC4O15439 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.25■□□□□ 0.99
ABCC4O15439 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ABCC4O15439 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.25■□□□□ 0.99
ABCC4O15439 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms