Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 ARHGAP23P1-201ENST00000562773 1937 ntBASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 AC012313.8-201ENST00000595059 5402 ntBASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 FER1L5-206ENST00000624922 6367 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 REXO1L2P-201ENST00000425429 2069 ntBASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 CICP24-201ENST00000605464 2705 ntBASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 PBX1-209ENST00000485769 834 ntTSL 2 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 AC105020.6-201ENST00000621523 1217 ntBASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 GAS2L1P1-201ENST00000420145 1480 ntBASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 AC073869.1-201ENST00000415574 2762 ntBASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CHKB-CPT1BH3BT56 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms