Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 AC016027.1-202ENST00000607927 1699 ntBASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TBC1D3FA6NER0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TBC1D3FA6NER0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 DUX4L27-201ENST00000554796 1261 ntBASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 SPCS2P1-201ENST00000561636 679 ntBASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 MIR4492-201ENST00000581627 80 ntBASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 AC015911.4-201ENST00000588022 1070 ntBASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 AC008267.7-201ENST00000624570 1194 ntBASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 TUBB3P1-201ENST00000405796 1332 ntBASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.7■□□□□ 0.26
TBC1D3FA6NER0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 AC092053.1-201ENST00000605787 1936 ntBASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 GPS2P2-201ENST00000430745 888 ntBASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 AC069262.1-201ENST00000539058 672 ntBASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 AL512356.2-201ENST00000546955 174 ntBASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 AC021097.1-201ENST00000607902 574 ntBASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 AC108860.2-201ENST00000562760 2183 ntBASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 TUBB8P12-201ENST00000308911 1335 ntBASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 TUBB7P-202ENST00000428444 1305 ntBASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 TUBB8P7-204ENST00000567960 1332 ntBASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms