Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCCD1A6NED2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RCCD1A6NED2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RCCD1A6NED2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RCCD1A6NED2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCCD1A6NED2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCCD1A6NED2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
RCCD1A6NED2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
RCCD1A6NED2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RCCD1A6NED2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.9■□□□□ 0.46
RCCD1A6NED2 MIR5100-201ENST00000579544 119 ntBASIC17.9■□□□□ 0.46
RCCD1A6NED2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCCD1A6NED2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCCD1A6NED2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.9■□□□□ 0.46
RCCD1A6NED2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCCD1A6NED2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
RCCD1A6NED2 AC144831.1-201ENST00000573312 2656 ntBASIC17.9■□□□□ 0.46
RCCD1A6NED2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.9■□□□□ 0.46
RCCD1A6NED2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.89■□□□□ 0.46
RCCD1A6NED2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RCCD1A6NED2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
RCCD1A6NED2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RCCD1A6NED2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCCD1A6NED2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCCD1A6NED2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCCD1A6NED2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCCD1A6NED2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCCD1A6NED2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 POM121L3P-201ENST00000419331 1163 ntBASIC17.89■□□□□ 0.45
RCCD1A6NED2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 BX005266.1-201ENST00000473402 457 ntBASIC17.89■□□□□ 0.45
RCCD1A6NED2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 MIR4492-201ENST00000581627 80 ntBASIC17.89■□□□□ 0.45
RCCD1A6NED2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RCCD1A6NED2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 AC092329.2-201ENST00000598402 547 ntBASIC17.89■□□□□ 0.45
RCCD1A6NED2 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 AP001269.4-201ENST00000609611 512 ntBASIC17.89■□□□□ 0.45
RCCD1A6NED2 AC010331.1-201ENST00000611423 582 ntBASIC17.89■□□□□ 0.45
RCCD1A6NED2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RCCD1A6NED2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCCD1A6NED2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RCCD1A6NED2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RCCD1A6NED2 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.89■□□□□ 0.45
RCCD1A6NED2 TOP3BP1-201ENST00000420768 1380 ntBASIC17.89■□□□□ 0.45
RCCD1A6NED2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCCD1A6NED2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCCD1A6NED2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCCD1A6NED2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.89■□□□□ 0.45
RCCD1A6NED2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RCCD1A6NED2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCCD1A6NED2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCCD1A6NED2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCCD1A6NED2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RCCD1A6NED2 PCED1CP-201ENST00000419887 785 ntBASIC17.88■□□□□ 0.45
RCCD1A6NED2 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RCCD1A6NED2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCCD1A6NED2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCCD1A6NED2 AC006449.6-201ENST00000612330 2296 ntBASIC17.88■□□□□ 0.45
RCCD1A6NED2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCCD1A6NED2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCCD1A6NED2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RCCD1A6NED2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.87■□□□□ 0.45
RCCD1A6NED2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RCCD1A6NED2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RCCD1A6NED2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.87■□□□□ 0.45
RCCD1A6NED2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.87■□□□□ 0.45
RCCD1A6NED2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RCCD1A6NED2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.87■□□□□ 0.45
RCCD1A6NED2 AP000867.3-201ENST00000524675 377 ntBASIC17.87■□□□□ 0.45
RCCD1A6NED2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.87■□□□□ 0.45
RCCD1A6NED2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms