Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 AC107918.2-201ENST00000530817 355 ntBASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 PGM5P2-202ENST00000637225 1043 ntBASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 CICP6-201ENST00000457191 2729 ntBASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 MPDU1-223ENST00000582151 728 ntBASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 AC013467.2-201ENST00000605472 835 ntBASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CCDC162PA2VCL2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 AC108073.2-201ENST00000464002 357 ntBASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 AP001005.1-201ENST00000571755 1248 ntBASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 AC004790.2-201ENST00000623588 572 ntBASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 AC116407.3-201ENST00000623905 1129 ntBASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms