Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC018695.7-201ENST00000624587 2492 ntBASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 KRT18P27-201ENST00000427733 1299 ntBASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC009947.1-201ENST00000444350 727 ntBASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 STK25P1-201ENST00000585406 838 ntBASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC004706.3-202ENST00000621574 984 ntBASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC148477.5-201ENST00000625164 1645 ntBASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC073621.1-201ENST00000392730 636 ntBASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC040169.1-201ENST00000565382 521 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms