Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 AC021087.4-201ENST00000563761 564 ntBASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 AC006557.2-201ENST00000592985 1240 ntBASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 AC025062.2-201ENST00000605477 670 ntBASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 AF228730.7-201ENST00000641842 219 ntBASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 AC006449.5-201ENST00000610658 2098 ntBASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 KRT8P49-201ENST00000604166 1432 ntBASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA11Q9Y5H2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 AC092850.2-201ENST00000623821 2697 ntBASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 AC107918.4-202ENST00000641623 219 ntBASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms