Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 PCDHA3-202ENST00000532566 4594 ntBASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 AC005840.4-201ENST00000541242 2494 ntBASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 RPS2P4-201ENST00000476944 856 ntBASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 AC083906.2-201ENST00000511578 360 ntBASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 AL139327.4-201ENST00000612362 153 ntBASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 LINC00167-201ENST00000530583 1419 ntBASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC12.17□□□□□ -0.46
CHTOPQ9Y3Y2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 KRASP1-201ENST00000407852 552 ntBASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 AC005104.2-201ENST00000427818 678 ntBASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 AL355355.2-201ENST00000442321 338 ntBASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 AC124947.2-201ENST00000547118 1133 ntBASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 MTDHP1-201ENST00000605323 784 ntBASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 AC073111.5-205ENST00000641717 521 ntBASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 KRT16P1-201ENST00000399124 1418 ntBASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms