Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 MIR718-201ENST00000390190 70 ntBASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 IGHGP-201ENST00000390555 1178 ntBASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 Z99916.2-201ENST00000604037 246 ntBASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 AC019129.2-201ENST00000609837 1235 ntBASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 MTHFR-217ENST00000641820 1569 ntBASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 ZNF444P1-201ENST00000559497 298 ntBASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 AC140113.3-201ENST00000605663 199 ntBASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
KCNIP3Q9Y2W7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
KCNIP3Q9Y2W7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms