Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLCF1Q9UBD9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.95□□□□□ -0.02
CLCF1Q9UBD9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCF1Q9UBD9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLCF1Q9UBD9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCF1Q9UBD9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCF1Q9UBD9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.95□□□□□ -0.02
CLCF1Q9UBD9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.95□□□□□ -0.02
CLCF1Q9UBD9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCF1Q9UBD9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CLCF1Q9UBD9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCF1Q9UBD9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 AL627223.1-201ENST00000416693 442 ntBASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 AC079140.1-201ENST00000508039 487 ntBASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CLCF1Q9UBD9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 WASH6P-202ENST00000359512 1437 ntBASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 AL139400.1-201ENST00000366220 510 ntBASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 AC093520.2-201ENST00000561830 333 ntBASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 AC027796.2-201ENST00000575326 344 ntBASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 AC009093.7-201ENST00000623853 1223 ntBASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.93□□□□□ -0.02
CLCF1Q9UBD9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms