Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SALL1Q9NSC2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SALL1Q9NSC2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
SALL1Q9NSC2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SALL1Q9NSC2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SALL1Q9NSC2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 AL138918.1-201ENST00000568306 659 ntBASIC20.16■□□□□ 0.82
SALL1Q9NSC2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 AC011676.5-201ENST00000624864 2660 ntBASIC20.16■□□□□ 0.82
SALL1Q9NSC2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
SALL1Q9NSC2 SNX33P1-201ENST00000592116 1762 ntBASIC20.16■□□□□ 0.82
SALL1Q9NSC2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 BCRP1-201ENST00000444246 691 ntBASIC20.15■□□□□ 0.82
SALL1Q9NSC2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 ALG1L8P-201ENST00000533887 760 ntBASIC20.15■□□□□ 0.82
SALL1Q9NSC2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 LINC02084-201ENST00000606069 1096 ntBASIC20.15■□□□□ 0.82
SALL1Q9NSC2 AL096865.1-201ENST00000606796 927 ntBASIC20.15■□□□□ 0.82
SALL1Q9NSC2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 TUBB3P1-201ENST00000405796 1332 ntBASIC20.15■□□□□ 0.82
SALL1Q9NSC2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SALL1Q9NSC2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.14■□□□□ 0.82
SALL1Q9NSC2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 AC105233.2-201ENST00000523697 349 ntBASIC20.14■□□□□ 0.81
SALL1Q9NSC2 AF228730.5-201ENST00000530288 346 ntBASIC20.14■□□□□ 0.81
SALL1Q9NSC2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 DUX4L27-201ENST00000554796 1261 ntBASIC20.14■□□□□ 0.81
SALL1Q9NSC2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 AC099398.1-201ENST00000567919 2776 ntBASIC20.14■□□□□ 0.81
SALL1Q9NSC2 AGGF1P2-201ENST00000426656 2106 ntBASIC20.14■□□□□ 0.81
SALL1Q9NSC2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SALL1Q9NSC2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms