Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 AC004233.3-201ENST00000607794 1269 ntBASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 AL590560.3-201ENST00000623350 461 ntBASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 AC073592.8-201ENST00000624126 511 ntBASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 CU639417.3-201ENST00000624240 1404 ntBASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 AC008267.7-201ENST00000624570 1194 ntBASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 WASH6P-202ENST00000359512 1437 ntBASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 SPTLC1P1-201ENST00000447199 261 ntBASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 AC027369.6-201ENST00000525520 931 ntBASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 AC012569.1-201ENST00000591191 1524 ntBASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM7Q9NR12 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 AC022144.1-201ENST00000602255 1580 ntBASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 MIR346-201ENST00000362234 95 ntBASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 AC131009.4-201ENST00000624048 1740 ntBASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 TUBB8P12-201ENST00000308911 1335 ntBASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 TUBB7P-202ENST00000428444 1305 ntBASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 TUBB8P7-204ENST00000567960 1332 ntBASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PDLIM7Q9NR12 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 PCDHB17P-201ENST00000539533 2393 ntBASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 HCG4-201ENST00000418983 998 ntBASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms