Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 RPL13AP23-201ENST00000480739 586 ntBASIC14.76□□□□□ -0.05
CDH20Q9HBT6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 AC004790.2-201ENST00000623588 572 ntBASIC14.76□□□□□ -0.05
CDH20Q9HBT6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH20Q9HBT6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 AC009947.1-201ENST00000444350 727 ntBASIC14.75□□□□□ -0.05
CDH20Q9HBT6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 AC010654.1-201ENST00000615722 808 ntBASIC14.75□□□□□ -0.05
CDH20Q9HBT6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH20Q9HBT6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH20Q9HBT6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH20Q9HBT6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH20Q9HBT6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH20Q9HBT6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH20Q9HBT6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH20Q9HBT6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH20Q9HBT6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH20Q9HBT6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH20Q9HBT6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH20Q9HBT6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH20Q9HBT6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH20Q9HBT6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms