Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC008267.7-201ENST00000624570 1194 ntBASIC18.1■□□□□ 0.49
NXF3Q9H4D5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.09■□□□□ 0.49
NXF3Q9H4D5 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 AP000842.3-202ENST00000569238 1080 ntBASIC18.09■□□□□ 0.49
NXF3Q9H4D5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 AC084121.4-201ENST00000641598 221 ntBASIC18.09■□□□□ 0.49
NXF3Q9H4D5 AF228730.8-201ENST00000642140 221 ntBASIC18.09■□□□□ 0.49
NXF3Q9H4D5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.09■□□□□ 0.49
NXF3Q9H4D5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NXF3Q9H4D5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.08■□□□□ 0.49
NXF3Q9H4D5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
NXF3Q9H4D5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NXF3Q9H4D5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NXF3Q9H4D5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NXF3Q9H4D5 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.08■□□□□ 0.48
NXF3Q9H4D5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 SPDYE14P-201ENST00000442619 822 ntBASIC18.08■□□□□ 0.48
NXF3Q9H4D5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 FAM86GP-201ENST00000448322 971 ntBASIC18.08■□□□□ 0.48
NXF3Q9H4D5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 AP001059.3-201ENST00000619053 235 ntBASIC18.08■□□□□ 0.48
NXF3Q9H4D5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 AL645728.1-201ENST00000366221 2101 ntBASIC18.08■□□□□ 0.48
NXF3Q9H4D5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NXF3Q9H4D5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 AP001094.4-201ENST00000579008 2176 ntBASIC18.07■□□□□ 0.48
NXF3Q9H4D5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 AC026150.2-201ENST00000564693 1156 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms