Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 AC092329.2-201ENST00000598402 547 ntBASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 AC116407.4-201ENST00000623319 1061 ntBASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHACTR1Q9C0D0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 AP002383.4-201ENST00000442518 975 ntBASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 TOB2P1-201ENST00000469761 992 ntBASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 AC087388.1-201ENST00000571370 1112 ntBASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 AC105917.1-201ENST00000506637 2539 ntBASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.11■□□□□ 0.33
PHACTR1Q9C0D0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 FAM86EP-206ENST00000510506 987 ntBASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms