Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 AP001160.2-201ENST00000596071 487 ntBASIC16.94■□□□□ 0.3
TRIM4Q9C037 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 AC007950.2-201ENST00000615045 2347 ntBASIC16.94■□□□□ 0.3
TRIM4Q9C037 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRIM4Q9C037 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRIM4Q9C037 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM4Q9C037 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM4Q9C037 AC005332.3-201ENST00000589904 676 ntBASIC16.93■□□□□ 0.3
TRIM4Q9C037 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM4Q9C037 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM4Q9C037 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
TRIM4Q9C037 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM4Q9C037 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM4Q9C037 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM4Q9C037 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRIM4Q9C037 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM4Q9C037 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 NSUN5P1-202ENST00000421140 1535 ntBASIC16.92■□□□□ 0.3
TRIM4Q9C037 NSUN5P2-203ENST00000457352 1529 ntBASIC16.92■□□□□ 0.3
TRIM4Q9C037 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 IGHV3-47-201ENST00000425060 335 ntBASIC16.92■□□□□ 0.3
TRIM4Q9C037 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 PGAM5P1-201ENST00000518923 814 ntBASIC16.92■□□□□ 0.3
TRIM4Q9C037 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 MIR7706-201ENST00000613747 67 ntBASIC16.92■□□□□ 0.3
TRIM4Q9C037 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM4Q9C037 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM4Q9C037 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM4Q9C037 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM4Q9C037 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM4Q9C037 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM4Q9C037 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM4Q9C037 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM4Q9C037 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM4Q9C037 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms