Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 AL391825.1-201ENST00000457671 1364 ntBASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDH11XQ9BZA7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
PCDH11XQ9BZA7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
PCDH11XQ9BZA7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC21.58■■□□□ 1.04
PCDH11XQ9BZA7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PCDH11XQ9BZA7 CROCCP2-202ENST00000412962 2773 ntBASIC21.58■■□□□ 1.04
PCDH11XQ9BZA7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.58■■□□□ 1.04
PCDH11XQ9BZA7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 AC092053.1-201ENST00000605787 1936 ntBASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 GNAQP1-201ENST00000444815 1067 ntBASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 GPR53P-205ENST00000457298 1084 ntBASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDH11XQ9BZA7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 IGHV3-72-202ENST00000621503 303 ntBASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDH11XQ9BZA7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms