Protein–RNA interactions for Protein: Q9BX63

BRIP1, Fanconi anemia group J protein, humanhuman

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1Q9BX63 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.67■□□□□ 0.9
BRIP1Q9BX63 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.67■□□□□ 0.9
BRIP1Q9BX63 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
BRIP1Q9BX63 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.67■□□□□ 0.9
BRIP1Q9BX63 AC068880.1-201ENST00000507289 2297 ntBASIC20.67■□□□□ 0.9
BRIP1Q9BX63 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRIP1Q9BX63 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
BRIP1Q9BX63 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.67■□□□□ 0.9
BRIP1Q9BX63 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRIP1Q9BX63 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 AL512384.1-201ENST00000406683 331 ntBASIC20.65■□□□□ 0.9
BRIP1Q9BX63 AP006294.1-201ENST00000415407 339 ntBASIC20.65■□□□□ 0.9
BRIP1Q9BX63 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 RN7SL752P-201ENST00000463779 287 ntBASIC20.65■□□□□ 0.9
BRIP1Q9BX63 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 AC017083.2-201ENST00000608069 979 ntBASIC20.65■□□□□ 0.9
BRIP1Q9BX63 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRIP1Q9BX63 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.64■□□□□ 0.9
BRIP1Q9BX63 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.64■□□□□ 0.9
BRIP1Q9BX63 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
BRIP1Q9BX63 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BRIP1Q9BX63 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 AC079776.1-201ENST00000401540 1152 ntBASIC20.64■□□□□ 0.89
BRIP1Q9BX63 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.64■□□□□ 0.89
BRIP1Q9BX63 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BRIP1Q9BX63 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.63■□□□□ 0.89
BRIP1Q9BX63 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.63■□□□□ 0.89
BRIP1Q9BX63 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRIP1Q9BX63 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRIP1Q9BX63 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
BRIP1Q9BX63 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.63■□□□□ 0.89
BRIP1Q9BX63 AC132938.2-201ENST00000579188 680 ntBASIC20.63■□□□□ 0.89
BRIP1Q9BX63 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.63■□□□□ 0.89
BRIP1Q9BX63 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.63■□□□□ 0.89
BRIP1Q9BX63 AL591163.1-201ENST00000641757 987 ntBASIC20.63■□□□□ 0.89
BRIP1Q9BX63 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
BRIP1Q9BX63 AC020763.4-201ENST00000623414 4170 ntBASIC20.63■□□□□ 0.89
BRIP1Q9BX63 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRIP1Q9BX63 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BRIP1Q9BX63 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
BRIP1Q9BX63 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.63■□□□□ 0.89
BRIP1Q9BX63 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.63■□□□□ 0.89
BRIP1Q9BX63 AC108860.2-201ENST00000562760 2183 ntBASIC20.62■□□□□ 0.89
BRIP1Q9BX63 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
BRIP1Q9BX63 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.62■□□□□ 0.89
BRIP1Q9BX63 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRIP1Q9BX63 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms