Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 AD000864.1-201ENST00000624076 2295 ntBASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 AC068137.2-201ENST00000605408 478 ntBASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 AL645728.2-201ENST00000641974 660 ntBASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 AL021920.2-201ENST00000624828 1351 ntBASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP3Q9BWW4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 AC211486.1-202ENST00000416371 468 ntBASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 HTR5BP-201ENST00000430851 1154 ntBASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 MKNK2P1-201ENST00000437526 628 ntBASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 AC211476.1-201ENST00000503899 468 ntBASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 AL078644.1-201ENST00000609881 752 ntBASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 REXO1L3P-201ENST00000622202 1288 ntBASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms