Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 VN2R19P-201ENST00000442399 1052 ntBASIC11.78□□□□□ -0.52
UPK3BQ9BT76 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 AL355312.1-201ENST00000407115 2176 ntBASIC11.78□□□□□ -0.52
UPK3BQ9BT76 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 AC012317.2-201ENST00000623305 2251 ntBASIC11.77□□□□□ -0.52
UPK3BQ9BT76 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UPK3BQ9BT76 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UPK3BQ9BT76 AC016396.2-201ENST00000562575 1417 ntBASIC11.77□□□□□ -0.52
UPK3BQ9BT76 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
UPK3BQ9BT76 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UPK3BQ9BT76 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
UPK3BQ9BT76 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC11.77□□□□□ -0.52
UPK3BQ9BT76 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
UPK3BQ9BT76 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UPK3BQ9BT76 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UPK3BQ9BT76 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 GNAS-203ENST00000306120 1878 ntBASIC11.77□□□□□ -0.53
UPK3BQ9BT76 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 KRT18P13-201ENST00000400056 1290 ntBASIC11.77□□□□□ -0.53
UPK3BQ9BT76 MIR940-201ENST00000401276 94 ntBASIC11.77□□□□□ -0.53
UPK3BQ9BT76 BX842568.4-201ENST00000421222 227 ntBASIC11.77□□□□□ -0.53
UPK3BQ9BT76 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 NMU-202ENST00000505262 693 ntTSL 3 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 AC002347.1-201ENST00000569543 541 ntBASIC11.77□□□□□ -0.53
UPK3BQ9BT76 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 PI4KAP1-204ENST00000612579 1703 ntBASIC11.77□□□□□ -0.53
UPK3BQ9BT76 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
UPK3BQ9BT76 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms