Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 FAM86EP-206ENST00000510506 987 ntBASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 Z69720.1-201ENST00000601483 472 ntBASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 SPDYE21P-201ENST00000413323 827 ntBASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 AP002414.4-201ENST00000589764 1148 ntBASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 AP000867.4-201ENST00000641616 219 ntBASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.26□□□□□ -0.13
HDHD3Q9BSH5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 LINC00982-205ENST00000420957 435 ntBASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 DRAXINP1-201ENST00000437611 948 ntBASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms