Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.83□□□□□ -0.36
VGLL1Q99990 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.83□□□□□ -0.36
VGLL1Q99990 AC246785.2-201ENST00000432512 513 ntBASIC12.83□□□□□ -0.36
VGLL1Q99990 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.83□□□□□ -0.36
VGLL1Q99990 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.83□□□□□ -0.36
VGLL1Q99990 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
VGLL1Q99990 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.83□□□□□ -0.36
VGLL1Q99990 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.83□□□□□ -0.36
VGLL1Q99990 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.83□□□□□ -0.36
VGLL1Q99990 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.83□□□□□ -0.36
VGLL1Q99990 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.83□□□□□ -0.36
VGLL1Q99990 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.83□□□□□ -0.36
VGLL1Q99990 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
VGLL1Q99990 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.83□□□□□ -0.36
VGLL1Q99990 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.83□□□□□ -0.36
VGLL1Q99990 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
VGLL1Q99990 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 TUBB8P12-201ENST00000308911 1335 ntBASIC12.83□□□□□ -0.36
VGLL1Q99990 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 TUBB7P-202ENST00000428444 1305 ntBASIC12.83□□□□□ -0.36
VGLL1Q99990 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.83□□□□□ -0.36
VGLL1Q99990 TUBB8P7-204ENST00000567960 1332 ntBASIC12.83□□□□□ -0.36
VGLL1Q99990 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
VGLL1Q99990 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
VGLL1Q99990 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.83□□□□□ -0.36
VGLL1Q99990 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
VGLL1Q99990 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
VGLL1Q99990 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.83□□□□□ -0.36
VGLL1Q99990 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.83□□□□□ -0.36
VGLL1Q99990 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.82□□□□□ -0.36
VGLL1Q99990 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.82□□□□□ -0.36
VGLL1Q99990 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.82□□□□□ -0.36
VGLL1Q99990 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 ALOX12P2-203ENST00000570921 1945 ntBASIC12.82□□□□□ -0.36
VGLL1Q99990 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.82□□□□□ -0.36
VGLL1Q99990 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
VGLL1Q99990 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
VGLL1Q99990 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.82□□□□□ -0.36
VGLL1Q99990 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
VGLL1Q99990 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.82□□□□□ -0.36
VGLL1Q99990 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.82□□□□□ -0.36
VGLL1Q99990 VENTXP7-201ENST00000475503 772 ntBASIC12.82□□□□□ -0.36
VGLL1Q99990 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 AP002490.2-201ENST00000524791 560 ntBASIC12.82□□□□□ -0.36
VGLL1Q99990 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.82□□□□□ -0.36
VGLL1Q99990 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.82□□□□□ -0.36
VGLL1Q99990 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.82□□□□□ -0.36
VGLL1Q99990 AP005901.3-202ENST00000581653 237 ntBASIC12.82□□□□□ -0.36
VGLL1Q99990 AC011467.2-201ENST00000598425 242 ntBASIC12.82□□□□□ -0.36
VGLL1Q99990 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.82□□□□□ -0.36
VGLL1Q99990 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.82□□□□□ -0.36
VGLL1Q99990 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.82□□□□□ -0.36
VGLL1Q99990 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VGLL1Q99990 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
VGLL1Q99990 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VGLL1Q99990 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.82□□□□□ -0.36
VGLL1Q99990 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VGLL1Q99990 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.82□□□□□ -0.36
VGLL1Q99990 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.82□□□□□ -0.36
VGLL1Q99990 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VGLL1Q99990 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.81□□□□□ -0.36
VGLL1Q99990 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VGLL1Q99990 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
VGLL1Q99990 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VGLL1Q99990 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
VGLL1Q99990 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VGLL1Q99990 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VGLL1Q99990 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VGLL1Q99990 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms