Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM11Q96F44 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM11Q96F44 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM11Q96F44 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM11Q96F44 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM11Q96F44 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM11Q96F44 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM11Q96F44 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 OR7E14P-202ENST00000530490 1290 ntBASIC17.81■□□□□ 0.44
TRIM11Q96F44 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM11Q96F44 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM11Q96F44 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM11Q96F44 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM11Q96F44 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM11Q96F44 AC006449.5-201ENST00000610658 2098 ntBASIC17.81■□□□□ 0.44
TRIM11Q96F44 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM11Q96F44 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM11Q96F44 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM11Q96F44 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM11Q96F44 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM11Q96F44 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM11Q96F44 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 KRT18P27-201ENST00000427733 1299 ntBASIC17.8■□□□□ 0.44
TRIM11Q96F44 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 RPS15P9-201ENST00000494093 319 ntBASIC17.8■□□□□ 0.44
TRIM11Q96F44 AC136632.2-201ENST00000512891 861 ntBASIC17.8■□□□□ 0.44
TRIM11Q96F44 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 MIR4492-201ENST00000581627 80 ntBASIC17.8■□□□□ 0.44
TRIM11Q96F44 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM11Q96F44 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.8■□□□□ 0.44
TRIM11Q96F44 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM11Q96F44 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM11Q96F44 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM11Q96F44 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM11Q96F44 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM11Q96F44 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM11Q96F44 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM11Q96F44 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRIM11Q96F44 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM11Q96F44 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 SLC25A6P2-201ENST00000497974 877 ntBASIC17.79■□□□□ 0.44
TRIM11Q96F44 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 AL353732.1-201ENST00000569618 1459 ntBASIC17.79■□□□□ 0.44
TRIM11Q96F44 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms