Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
RNF31Q96EP0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF31Q96EP0 ACTL9-202ENST00000612068 1252 ntBASIC16.28■□□□□ 0.2
RNF31Q96EP0 GGTLC5P-201ENST00000617623 998 ntBASIC16.28■□□□□ 0.2
RNF31Q96EP0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF31Q96EP0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF31Q96EP0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
RNF31Q96EP0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF31Q96EP0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RNF31Q96EP0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF31Q96EP0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF31Q96EP0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF31Q96EP0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RNF31Q96EP0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF31Q96EP0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RNF31Q96EP0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF31Q96EP0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF31Q96EP0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF31Q96EP0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RNF31Q96EP0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF31Q96EP0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF31Q96EP0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF31Q96EP0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF31Q96EP0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF31Q96EP0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF31Q96EP0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF31Q96EP0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF31Q96EP0 AC011676.5-201ENST00000624864 2660 ntBASIC16.27■□□□□ 0.2
RNF31Q96EP0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF31Q96EP0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF31Q96EP0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF31Q96EP0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RNF31Q96EP0 NKILA-202ENST00000614771 2598 ntBASIC16.27■□□□□ 0.2
RNF31Q96EP0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF31Q96EP0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
RNF31Q96EP0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF31Q96EP0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF31Q96EP0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF31Q96EP0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF31Q96EP0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RNF31Q96EP0 ACTG1P4-201ENST00000425123 1122 ntBASIC16.27■□□□□ 0.2
RNF31Q96EP0 RHOQP3-201ENST00000437982 621 ntBASIC16.27■□□□□ 0.2
RNF31Q96EP0 AC087163.2-201ENST00000457299 853 ntBASIC16.27■□□□□ 0.2
RNF31Q96EP0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF31Q96EP0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF31Q96EP0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF31Q96EP0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF31Q96EP0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF31Q96EP0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF31Q96EP0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RNF31Q96EP0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF31Q96EP0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF31Q96EP0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF31Q96EP0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
RNF31Q96EP0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 CICP6-201ENST00000457191 2729 ntBASIC16.26■□□□□ 0.19
RNF31Q96EP0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 AC092902.6-201ENST00000641783 218 ntBASIC16.26■□□□□ 0.19
RNF31Q96EP0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 AL391005.1-201ENST00000623953 2435 ntBASIC16.26■□□□□ 0.19
RNF31Q96EP0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF31Q96EP0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF31Q96EP0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RNF31Q96EP0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF31Q96EP0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms