Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 AC092474.2-201ENST00000424288 719 ntBASIC18.06■□□□□ 0.48
BEST2Q8NFU1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 CNN2P11-201ENST00000429351 262 ntBASIC18.05■□□□□ 0.48
BEST2Q8NFU1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 RARRES2P8-201ENST00000566335 367 ntBASIC18.05■□□□□ 0.48
BEST2Q8NFU1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.05■□□□□ 0.48
BEST2Q8NFU1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 AC021097.1-201ENST00000607902 574 ntBASIC18.05■□□□□ 0.48
BEST2Q8NFU1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 AL391256.1-201ENST00000443260 1855 ntBASIC18.05■□□□□ 0.48
BEST2Q8NFU1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BEST2Q8NFU1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 ADH5P3-201ENST00000433842 1137 ntBASIC18.04■□□□□ 0.48
BEST2Q8NFU1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 AC026120.1-201ENST00000611536 926 ntBASIC18.04■□□□□ 0.48
BEST2Q8NFU1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms