Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC82Q8N4S0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCDC82Q8N4S0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC82Q8N4S0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 SLC22A20-204ENST00000530038 1673 ntBASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 TUBB8P12-201ENST00000308911 1335 ntBASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 TUBB7P-202ENST00000428444 1305 ntBASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 TUBB8P7-204ENST00000567960 1332 ntBASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC82Q8N4S0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 AL513480.1-201ENST00000451731 511 ntBASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 AL391256.1-201ENST00000443260 1855 ntBASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC82Q8N4S0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 AL603756.1-201ENST00000606511 2163 ntBASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC82Q8N4S0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms