Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 ELK2BP-201ENST00000415014 1224 ntBASIC15.59■□□□□ 0.09
VRK2Q86Y07 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 LINC01711-201ENST00000598340 967 ntBASIC15.59■□□□□ 0.09
VRK2Q86Y07 IFNL4P1-201ENST00000607083 540 ntBASIC15.59■□□□□ 0.09
VRK2Q86Y07 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.59■□□□□ 0.09
VRK2Q86Y07 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VRK2Q86Y07 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VRK2Q86Y07 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
VRK2Q86Y07 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VRK2Q86Y07 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.58■□□□□ 0.09
VRK2Q86Y07 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
VRK2Q86Y07 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
VRK2Q86Y07 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
VRK2Q86Y07 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VRK2Q86Y07 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
VRK2Q86Y07 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
VRK2Q86Y07 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
VRK2Q86Y07 PI4KAP1-204ENST00000612579 1703 ntBASIC15.58■□□□□ 0.08
VRK2Q86Y07 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VRK2Q86Y07 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VRK2Q86Y07 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.58■□□□□ 0.08
VRK2Q86Y07 AC087163.2-201ENST00000457299 853 ntBASIC15.58■□□□□ 0.08
VRK2Q86Y07 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.58■□□□□ 0.08
VRK2Q86Y07 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.58■□□□□ 0.08
VRK2Q86Y07 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
VRK2Q86Y07 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.58■□□□□ 0.08
VRK2Q86Y07 AC013467.2-201ENST00000605472 835 ntBASIC15.58■□□□□ 0.08
VRK2Q86Y07 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.58■□□□□ 0.08
VRK2Q86Y07 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.58■□□□□ 0.08
VRK2Q86Y07 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
VRK2Q86Y07 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
VRK2Q86Y07 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.58■□□□□ 0.08
VRK2Q86Y07 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.58■□□□□ 0.08
VRK2Q86Y07 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
VRK2Q86Y07 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VRK2Q86Y07 TOP3BP1-201ENST00000420768 1380 ntBASIC15.58■□□□□ 0.08
VRK2Q86Y07 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.58■□□□□ 0.08
VRK2Q86Y07 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.58■□□□□ 0.08
VRK2Q86Y07 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
VRK2Q86Y07 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.58■□□□□ 0.08
VRK2Q86Y07 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 AC005052.1-201ENST00000625181 2492 ntBASIC15.57■□□□□ 0.08
VRK2Q86Y07 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.57■□□□□ 0.08
VRK2Q86Y07 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms