Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PACS2Q86VP3 AL122018.1-201ENST00000446607 2310 ntBASIC17.02■□□□□ 0.32
PACS2Q86VP3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PACS2Q86VP3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 AC007686.3-201ENST00000619017 3487 ntBASIC17.02■□□□□ 0.32
PACS2Q86VP3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PACS2Q86VP3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PACS2Q86VP3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PACS2Q86VP3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PACS2Q86VP3 FAM8A6P-201ENST00000407496 1135 ntBASIC17.02■□□□□ 0.32
PACS2Q86VP3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 KRT18P23-201ENST00000435622 1283 ntBASIC17.02■□□□□ 0.32
PACS2Q86VP3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 KRT18P35-201ENST00000510488 1269 ntBASIC17.02■□□□□ 0.32
PACS2Q86VP3 AC087388.1-201ENST00000571370 1112 ntBASIC17.02■□□□□ 0.32
PACS2Q86VP3 NTF6B-201ENST00000591913 560 ntBASIC17.02■□□□□ 0.32
PACS2Q86VP3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 AC024243.1-201ENST00000609234 778 ntBASIC17.02■□□□□ 0.32
PACS2Q86VP3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PACS2Q86VP3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PACS2Q86VP3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 AC016396.2-201ENST00000562575 1417 ntBASIC17.02■□□□□ 0.31
PACS2Q86VP3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PACS2Q86VP3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PACS2Q86VP3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.02■□□□□ 0.31
PACS2Q86VP3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
PACS2Q86VP3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.02■□□□□ 0.31
PACS2Q86VP3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.02■□□□□ 0.31
PACS2Q86VP3 MTHFR-217ENST00000641820 1569 ntBASIC17.02■□□□□ 0.31
PACS2Q86VP3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PACS2Q86VP3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PACS2Q86VP3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PACS2Q86VP3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.01■□□□□ 0.31
PACS2Q86VP3 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 AL445228.2-201ENST00000605589 952 ntBASIC17.01■□□□□ 0.31
PACS2Q86VP3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 AL391807.1-203ENST00000604392 2365 ntBASIC17.01■□□□□ 0.31
PACS2Q86VP3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PACS2Q86VP3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PACS2Q86VP3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PACS2Q86VP3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17■□□□□ 0.31
PACS2Q86VP3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PACS2Q86VP3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17■□□□□ 0.31
PACS2Q86VP3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17■□□□□ 0.31
PACS2Q86VP3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PACS2Q86VP3 REXO1L11P-201ENST00000620964 1927 ntBASIC17■□□□□ 0.31
PACS2Q86VP3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PACS2Q86VP3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17■□□□□ 0.31
PACS2Q86VP3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17■□□□□ 0.31
PACS2Q86VP3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17■□□□□ 0.31
PACS2Q86VP3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PACS2Q86VP3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17■□□□□ 0.31
PACS2Q86VP3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17■□□□□ 0.31
PACS2Q86VP3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17■□□□□ 0.31
PACS2Q86VP3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17■□□□□ 0.31
PACS2Q86VP3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17■□□□□ 0.31
PACS2Q86VP3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms