Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.84■□□□□ 0.77
SYNE3Q6ZMZ3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 AL590627.1-203ENST00000421194 1026 ntBASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 PRSS29P-201ENST00000440800 595 ntBASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 AC010654.1-201ENST00000615722 808 ntBASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SYNE3Q6ZMZ3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SYNE3Q6ZMZ3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SYNE3Q6ZMZ3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.83■□□□□ 0.76
SYNE3Q6ZMZ3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.83■□□□□ 0.76
SYNE3Q6ZMZ3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SYNE3Q6ZMZ3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SYNE3Q6ZMZ3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SYNE3Q6ZMZ3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SYNE3Q6ZMZ3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 FER1L4-210ENST00000615531 5998 ntBASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 CRYGEP-201ENST00000412192 528 ntBASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 AC009947.1-201ENST00000444350 727 ntBASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 REXO1L3P-201ENST00000622202 1288 ntBASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.82■□□□□ 0.76
SYNE3Q6ZMZ3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 IL9RP2-201ENST00000423948 1312 ntBASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 AGGF1P2-201ENST00000426656 2106 ntBASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 Z83851.2-201ENST00000609564 659 ntBASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.81■□□□□ 0.76
SYNE3Q6ZMZ3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms