Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 UNC93B7-201ENST00000509439 705 ntBASIC17.47■□□□□ 0.39
LRRC38Q5VT99 IGHV3-65-201ENST00000523210 341 ntBASIC17.47■□□□□ 0.39
LRRC38Q5VT99 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.47■□□□□ 0.39
LRRC38Q5VT99 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC38Q5VT99 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 HCG4-201ENST00000418983 998 ntBASIC17.46■□□□□ 0.39
LRRC38Q5VT99 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 DUSP5P1-201ENST00000441325 1139 ntBASIC17.46■□□□□ 0.39
LRRC38Q5VT99 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 AC087641.1-201ENST00000557561 1021 ntBASIC17.46■□□□□ 0.39
LRRC38Q5VT99 AP001350.2-201ENST00000625104 1094 ntBASIC17.46■□□□□ 0.39
LRRC38Q5VT99 PGM5P2-202ENST00000637225 1043 ntBASIC17.46■□□□□ 0.39
LRRC38Q5VT99 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC38Q5VT99 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
LRRC38Q5VT99 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LRRC38Q5VT99 AC092364.2-201ENST00000596710 2692 ntBASIC17.45■□□□□ 0.38
LRRC38Q5VT99 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 AC018712.1-201ENST00000455767 687 ntBASIC17.45■□□□□ 0.38
LRRC38Q5VT99 KRT18P56-201ENST00000507275 550 ntBASIC17.45■□□□□ 0.38
LRRC38Q5VT99 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC38Q5VT99 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms