Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VARS2Q5ST30 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VARS2Q5ST30 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VARS2Q5ST30 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
VARS2Q5ST30 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
VARS2Q5ST30 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VARS2Q5ST30 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VARS2Q5ST30 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
VARS2Q5ST30 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VARS2Q5ST30 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VARS2Q5ST30 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
VARS2Q5ST30 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VARS2Q5ST30 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VARS2Q5ST30 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VARS2Q5ST30 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
VARS2Q5ST30 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
VARS2Q5ST30 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.77■□□□□ 0.44
VARS2Q5ST30 SEC63P1-201ENST00000425785 1258 ntBASIC17.77■□□□□ 0.44
VARS2Q5ST30 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC17.77■□□□□ 0.44
VARS2Q5ST30 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.77■□□□□ 0.44
VARS2Q5ST30 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.77■□□□□ 0.44
VARS2Q5ST30 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VARS2Q5ST30 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.77■□□□□ 0.44
VARS2Q5ST30 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.77■□□□□ 0.44
VARS2Q5ST30 AC190387.1-201ENST00000551683 408 ntBASIC17.77■□□□□ 0.44
VARS2Q5ST30 AC026150.2-201ENST00000564693 1156 ntBASIC17.77■□□□□ 0.44
VARS2Q5ST30 AP000842.3-202ENST00000569238 1080 ntBASIC17.77■□□□□ 0.44
VARS2Q5ST30 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VARS2Q5ST30 AC005498.2-205ENST00000593218 784 ntBASIC17.77■□□□□ 0.44
VARS2Q5ST30 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.77■□□□□ 0.44
VARS2Q5ST30 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
VARS2Q5ST30 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
VARS2Q5ST30 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VARS2Q5ST30 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
VARS2Q5ST30 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VARS2Q5ST30 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
VARS2Q5ST30 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VARS2Q5ST30 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VARS2Q5ST30 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
VARS2Q5ST30 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
VARS2Q5ST30 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.77■□□□□ 0.43
VARS2Q5ST30 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
VARS2Q5ST30 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARS2Q5ST30 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARS2Q5ST30 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VARS2Q5ST30 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.76■□□□□ 0.43
VARS2Q5ST30 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
VARS2Q5ST30 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VARS2Q5ST30 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.76■□□□□ 0.43
VARS2Q5ST30 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.76■□□□□ 0.43
VARS2Q5ST30 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.76■□□□□ 0.43
VARS2Q5ST30 SPDYE14P-201ENST00000442619 822 ntBASIC17.76■□□□□ 0.43
VARS2Q5ST30 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.76■□□□□ 0.43
VARS2Q5ST30 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VARS2Q5ST30 DUX4L27-201ENST00000554796 1261 ntBASIC17.76■□□□□ 0.43
VARS2Q5ST30 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
VARS2Q5ST30 AL138918.1-201ENST00000568306 659 ntBASIC17.76■□□□□ 0.43
VARS2Q5ST30 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARS2Q5ST30 AC010326.4-201ENST00000604665 891 ntBASIC17.76■□□□□ 0.43
VARS2Q5ST30 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.76■□□□□ 0.43
VARS2Q5ST30 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.76■□□□□ 0.43
VARS2Q5ST30 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARS2Q5ST30 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARS2Q5ST30 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARS2Q5ST30 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARS2Q5ST30 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARS2Q5ST30 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARS2Q5ST30 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARS2Q5ST30 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARS2Q5ST30 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VARS2Q5ST30 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARS2Q5ST30 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.75■□□□□ 0.43
VARS2Q5ST30 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
VARS2Q5ST30 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VARS2Q5ST30 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.75■□□□□ 0.43
VARS2Q5ST30 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VARS2Q5ST30 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 MIR346-201ENST00000362234 95 ntBASIC17.75■□□□□ 0.43
VARS2Q5ST30 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
VARS2Q5ST30 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.75■□□□□ 0.43
VARS2Q5ST30 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VARS2Q5ST30 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 AC051619.7-201ENST00000568314 623 ntBASIC17.75■□□□□ 0.43
VARS2Q5ST30 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VARS2Q5ST30 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.75■□□□□ 0.43
VARS2Q5ST30 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.75■□□□□ 0.43
VARS2Q5ST30 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 AC020916.1-201ENST00000587762 1774 ntBASIC17.75■□□□□ 0.43
VARS2Q5ST30 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms