Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 GIMAP3P-201ENST00000495150 836 ntBASIC20.54■□□□□ 0.88
CCDC93Q567U6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC93Q567U6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC93Q567U6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC93Q567U6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC93Q567U6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCDC93Q567U6 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC93Q567U6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC93Q567U6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC93Q567U6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC93Q567U6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CCDC93Q567U6 AL353705.2-201ENST00000428243 662 ntBASIC20.53■□□□□ 0.88
CCDC93Q567U6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC93Q567U6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC93Q567U6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC93Q567U6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC93Q567U6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC93Q567U6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC93Q567U6 CETN4P-206ENST00000642099 2168 ntBASIC20.53■□□□□ 0.88
CCDC93Q567U6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC93Q567U6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC93Q567U6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC93Q567U6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC93Q567U6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CCDC93Q567U6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC93Q567U6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CCDC93Q567U6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC93Q567U6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC93Q567U6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC93Q567U6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CCDC93Q567U6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CCDC93Q567U6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC93Q567U6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC93Q567U6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC93Q567U6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.52■□□□□ 0.88
CCDC93Q567U6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC93Q567U6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CCDC93Q567U6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC93Q567U6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC93Q567U6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
CCDC93Q567U6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC93Q567U6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC93Q567U6 LINC00895-201ENST00000629028 1637 ntBASIC20.52■□□□□ 0.88
CCDC93Q567U6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC93Q567U6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC93Q567U6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
CCDC93Q567U6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CCDC93Q567U6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC93Q567U6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
CCDC93Q567U6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC93Q567U6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 EGFEM1P-202ENST00000431685 1563 ntBASIC20.51■□□□□ 0.87
CCDC93Q567U6 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.51■□□□□ 0.87
CCDC93Q567U6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC93Q567U6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC93Q567U6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC93Q567U6 AC099398.1-201ENST00000567919 2776 ntBASIC20.51■□□□□ 0.87
CCDC93Q567U6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC93Q567U6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.51■□□□□ 0.87
CCDC93Q567U6 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.51■□□□□ 0.87
CCDC93Q567U6 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.51■□□□□ 0.87
CCDC93Q567U6 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.51■□□□□ 0.87
CCDC93Q567U6 MIR6799-201ENST00000620297 69 ntBASIC20.51■□□□□ 0.87
CCDC93Q567U6 IGHV3-72-202ENST00000621503 303 ntBASIC20.51■□□□□ 0.87
CCDC93Q567U6 AC004840.1-201ENST00000636359 365 ntBASIC20.51■□□□□ 0.87
CCDC93Q567U6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC93Q567U6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC93Q567U6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC93Q567U6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC93Q567U6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms