Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDK5Q00535 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDK5Q00535 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDK5Q00535 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDK5Q00535 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDK5Q00535 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.22■□□□□ 0.03
CDK5Q00535 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDK5Q00535 NSUN5P1-202ENST00000421140 1535 ntBASIC15.22■□□□□ 0.03
CDK5Q00535 NSUN5P2-203ENST00000457352 1529 ntBASIC15.22■□□□□ 0.03
CDK5Q00535 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDK5Q00535 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDK5Q00535 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDK5Q00535 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDK5Q00535 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.21■□□□□ 0.03
CDK5Q00535 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.21■□□□□ 0.03
CDK5Q00535 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 GGT4P-201ENST00000623672 1708 ntBASIC15.21■□□□□ 0.03
CDK5Q00535 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CDK5Q00535 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDK5Q00535 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.21■□□□□ 0.03
CDK5Q00535 IGHV3-47-201ENST00000425060 335 ntBASIC15.21■□□□□ 0.03
CDK5Q00535 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 DRAXINP1-201ENST00000437611 948 ntBASIC15.21■□□□□ 0.03
CDK5Q00535 KRT17P6-201ENST00000453795 1220 ntBASIC15.21■□□□□ 0.03
CDK5Q00535 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.21■□□□□ 0.03
CDK5Q00535 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.21■□□□□ 0.03
CDK5Q00535 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.21■□□□□ 0.03
CDK5Q00535 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.21■□□□□ 0.03
CDK5Q00535 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.21■□□□□ 0.03
CDK5Q00535 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDK5Q00535 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.21■□□□□ 0.03
CDK5Q00535 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.21■□□□□ 0.03
CDK5Q00535 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CDK5Q00535 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDK5Q00535 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.21■□□□□ 0.03
CDK5Q00535 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.21■□□□□ 0.03
CDK5Q00535 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.21■□□□□ 0.03
CDK5Q00535 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDK5Q00535 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDK5Q00535 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDK5Q00535 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.21■□□□□ 0.02
CDK5Q00535 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.21■□□□□ 0.02
CDK5Q00535 LINC00554-201ENST00000564841 3011 ntBASIC15.21■□□□□ 0.02
CDK5Q00535 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CDK5Q00535 AL671710.1-201ENST00000610245 2349 ntBASIC15.21■□□□□ 0.02
CDK5Q00535 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDK5Q00535 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDK5Q00535 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CDK5Q00535 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDK5Q00535 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CDK5Q00535 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDK5Q00535 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDK5Q00535 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CDK5Q00535 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDK5Q00535 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CDK5Q00535 KRT18P1-202ENST00000452408 1331 ntBASIC15.2■□□□□ 0.02
CDK5Q00535 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDK5Q00535 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDK5Q00535 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDK5Q00535 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.2■□□□□ 0.02
CDK5Q00535 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDK5Q00535 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.2■□□□□ 0.02
CDK5Q00535 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDK5Q00535 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDK5Q00535 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.2■□□□□ 0.02
CDK5Q00535 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.2■□□□□ 0.02
CDK5Q00535 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDK5Q00535 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDK5Q00535 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
CDK5Q00535 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDK5Q00535 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.2■□□□□ 0.02
CDK5Q00535 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CDK5Q00535 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDK5Q00535 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CDK5Q00535 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.2■□□□□ 0.02
CDK5Q00535 TPSP2-201ENST00000561760 610 ntBASIC15.2■□□□□ 0.02
CDK5Q00535 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.2■□□□□ 0.02
CDK5Q00535 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.2■□□□□ 0.02
CDK5Q00535 LINC01023-201ENST00000606054 436 ntBASIC15.2■□□□□ 0.02
CDK5Q00535 AL353135.1-201ENST00000606729 504 ntBASIC15.2■□□□□ 0.02
CDK5Q00535 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms